RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 TMEM82A0PJX8 343 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 SLC1A7O00341 560 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 SERPINA3P01011 423 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 CCDC159P0C7I6 412 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 PPIAL4GP0DN37 164 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 RBP2P50120 134 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 ATP1B3P54709 279 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 HILS1P60008 231 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 ZP1P60852 638 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 COL10A1Q03692 680 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 PDZK1IP1Q13113 114 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 INSL4Q14641 139 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 PDCD1Q15116 288 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 CNN3Q15417 329 aaKnown RBP11.15□□□□□ -0.62
SNF8-206ENST00000509989 DEFB112Q30KQ8 113 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 LRRC10Q5BKY1 277 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 CD276Q5ZPR3 534 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 VMO1Q7Z5L0 202 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 EGFL6Q8IUX8 553 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 PARP16Q8N5Y8 322 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 OR52N4Q8NGI2 321 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 OR52N1Q8NH53 320 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 GHSRQ92847 366 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 LHX4Q969G2 390 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 C10orf35Q96D05 121 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 CYYR1Q96J86 154 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 OR5M11Q96RB7 305 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 DNTTIP1Q9H147 329 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 ZCCHC4Q9H5U6 513 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 CNTD2Q9H8S5 307 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 RASL12Q9NYN1 266 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 ZNF581Q9P0T4 197 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 DHDHQ9UQ10 334 aa11.15□□□□□ -0.62
SNF8-206ENST00000509989 EFCAB10A6NFE3 127 aa11.14□□□□□ -0.63
SNF8-206ENST00000509989 PTGES3LE9PB15 166 aa11.14□□□□□ -0.63
SNF8-206ENST00000509989 RNASEK-C17orf49H0YIS7 233 aa11.14□□□□□ -0.63
SNF8-206ENST00000509989 ZNF737O75373 536 aa11.14□□□□□ -0.63
SNF8-206ENST00000509989 MYL12AP19105 171 aa11.14□□□□□ -0.63
SNF8-206ENST00000509989 ZNF273Q14593 569 aa11.14□□□□□ -0.63
SNF8-206ENST00000509989 SMIM21Q3B7S5 101 aa11.14□□□□□ -0.63
SNF8-206ENST00000509989 ZNF529Q6P280 563 aa11.14□□□□□ -0.63
SNF8-206ENST00000509989 TMPRSS11AQ6ZMR5 421 aa11.14□□□□□ -0.63
SNF8-206ENST00000509989 STX19Q8N4C7 294 aa11.14□□□□□ -0.63
SNF8-206ENST00000509989 BPIFB2Q8N4F0 458 aa11.14□□□□□ -0.63
SNF8-206ENST00000509989 PIP4P2Q8N4L2 257 aa11.14□□□□□ -0.63
SNF8-206ENST00000509989 NANOGP1Q8N7R0 232 aa11.14□□□□□ -0.63
SNF8-206ENST00000509989 TPRX1Q8N7U7 411 aa11.14□□□□□ -0.63
SNF8-206ENST00000509989 PNLDC1Q8NA58 520 aaKnown RBP11.14□□□□□ -0.63
SNF8-206ENST00000509989 DNAAF1Q8NEP3 725 aa11.14□□□□□ -0.63
SNF8-206ENST00000509989 C8orf46Q8TAG6 207 aa11.14□□□□□ -0.63
SNF8-206ENST00000509989 TNFRSF14Q92956 283 aa11.14□□□□□ -0.63
SNF8-206ENST00000509989 EMG1Q92979 244 aaKnown RBP11.14□□□□□ -0.63
SNF8-206ENST00000509989 MRPL48Q96GC5 212 aaKnown RBP11.14□□□□□ -0.63
SNF8-206ENST00000509989 MED30Q96HR3 178 aa11.14□□□□□ -0.63
SNF8-206ENST00000509989 COMMD4Q9H0A8 199 aa11.14□□□□□ -0.63
SNF8-206ENST00000509989 CNOT2Q9NZN8 540 aaKnown RBP11.14□□□□□ -0.63
SNF8-206ENST00000509989 POLDIP2Q9Y2S7 368 aa11.14□□□□□ -0.63
SNF8-206ENST00000509989 TRAV8-7A0A075B6U6 113 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 TRBV5-5A0A0J9YX44 114 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 IRGMA1A4Y4 181 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 H0YHG0 523 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 H0YJX3 145 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 PIN1P1O15428 100 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 ECDO95905 644 aaPredicted RBP11.13□□□□□ -0.63
SNF8-206ENST00000509989 CDK1P06493 297 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 RPSAP08865 295 aaKnown RBP11.13□□□□□ -0.63
SNF8-206ENST00000509989 CCL3L1P16619 93 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 PRKACBP22694 351 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 MYF6P23409 242 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 PAX6P26367 422 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 CAPZA1P52907 286 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 CAV3P56539 151 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 CCDC58Q4VC31 144 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 HCP5Q6MZN7 132 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 METAP1DQ6UB28 335 aaPredicted RBP11.13□□□□□ -0.63
SNF8-206ENST00000509989 LHFPL2Q6ZUX7 228 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 TCF23Q7RTU1 214 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 FAM185AQ8N0U4 392 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 C11orf42Q8N5U0 333 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 OR10K1Q8NGX5 313 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 ZNF418Q8TF45 676 aaPredicted RBP11.13□□□□□ -0.63
SNF8-206ENST00000509989 TMEM158Q8WZ71 300 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 SMIM19Q96E16 107 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 MS4A7Q9GZW8 240 aaPredicted RBP11.13□□□□□ -0.63
SNF8-206ENST00000509989 CHST6Q9GZX3 395 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 VCXQ9H320 206 aa11.13□□□□□ -0.63
SNF8-206ENST00000509989 LSM2Q9Y333 95 aaKnown RBP11.13□□□□□ -0.63
SNF8-206ENST00000509989 DNAJC9-AS1A6NH13 148 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 GABRPO00591 440 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 SULT1B1O43704 296 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 PSPNO60542 156 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 KNG1P01042 644 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 MT-ND2P03891 347 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 TK1P04183 234 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 HCKP08631 526 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 PRKACAP17612 351 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 MRPL28Q13084 256 aaKnown RBP11.12□□□□□ -0.63
SNF8-206ENST00000509989 IRF3Q14653 427 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 KISS1Q15726 138 aa11.12□□□□□ -0.63
SNF8-206ENST00000509989 METTL11BQ5VVY1 283 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms