RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 BEX1Q9HBH7 125 aa15.3■□□□□ 0.04
UBE3D-207ENST00000509102 FAM118AQ9NWS6 357 aa15.3■□□□□ 0.04
UBE3D-207ENST00000509102 GLS2Q9UI32 602 aa15.3■□□□□ 0.04
UBE3D-207ENST00000509102 A0A1W2PRD5 423 aa15.29■□□□□ 0.04
UBE3D-207ENST00000509102 A0A1W2PRF3 423 aa15.29■□□□□ 0.04
UBE3D-207ENST00000509102 A0A1W2PRM7 423 aa15.29■□□□□ 0.04
UBE3D-207ENST00000509102 GABRB1P18505 474 aa15.29■□□□□ 0.04
UBE3D-207ENST00000509102 AZGP1P25311 298 aaKnown RBP15.29■□□□□ 0.04
UBE3D-207ENST00000509102 IER3P46695 156 aa15.29■□□□□ 0.04
UBE3D-207ENST00000509102 KLRD1Q13241 179 aa15.29■□□□□ 0.04
UBE3D-207ENST00000509102 ALKBH1Q13686 389 aaKnown RBP15.29■□□□□ 0.04
UBE3D-207ENST00000509102 GDPGP1Q6ZNW5 385 aa15.29■□□□□ 0.04
UBE3D-207ENST00000509102 GDPD3Q7L5L3 318 aa15.29■□□□□ 0.04
UBE3D-207ENST00000509102 LHFPL3Q86UP9 236 aa15.29■□□□□ 0.04
UBE3D-207ENST00000509102 EMG1Q92979 244 aaKnown RBP15.29■□□□□ 0.04
UBE3D-207ENST00000509102 ADAT3Q96EY9 351 aaPredicted RBP15.29■□□□□ 0.04
UBE3D-207ENST00000509102 PELI1Q96FA3 418 aa15.29■□□□□ 0.04
UBE3D-207ENST00000509102 HEXA-AS1Q9H8Q6 139 aa15.29■□□□□ 0.04
UBE3D-207ENST00000509102 AMBNQ9NP70 447 aa15.29■□□□□ 0.04
UBE3D-207ENST00000509102 C8orf4Q9NR00 106 aa15.29■□□□□ 0.04
UBE3D-207ENST00000509102 C19orf12Q9NSK7 152 aa15.29■□□□□ 0.04
UBE3D-207ENST00000509102 AASSQ9UDR5 926 aa15.29■□□□□ 0.04
UBE3D-207ENST00000509102 ANGPTL7O43827 346 aa15.28■□□□□ 0.04
UBE3D-207ENST00000509102 INMTO95050 263 aa15.28■□□□□ 0.04
UBE3D-207ENST00000509102 IGHV4-59P01825 116 aa15.28■□□□□ 0.04
UBE3D-207ENST00000509102 CCDC159P0C7I6 412 aa15.28■□□□□ 0.04
UBE3D-207ENST00000509102 ATF1P18846 271 aa15.28■□□□□ 0.04
UBE3D-207ENST00000509102 OMGP23515 440 aa15.28■□□□□ 0.04
UBE3D-207ENST00000509102 SAA4P35542 130 aa15.28■□□□□ 0.04
UBE3D-207ENST00000509102 POU3F4P49335 361 aa15.28■□□□□ 0.04
UBE3D-207ENST00000509102 GBX2P52951 348 aaPredicted RBP15.28■□□□□ 0.04
UBE3D-207ENST00000509102 RAG2P55895 527 aa15.28■□□□□ 0.04
UBE3D-207ENST00000509102 NANOS3P60323 173 aaKnown RBP15.28■□□□□ 0.04
UBE3D-207ENST00000509102 COL10A1Q03692 680 aa15.28■□□□□ 0.04
UBE3D-207ENST00000509102 ZSCAN4Q8NAM6 433 aaPredicted RBP15.28■□□□□ 0.04
UBE3D-207ENST00000509102 OR4M1Q8NGD0 313 aa15.28■□□□□ 0.04
UBE3D-207ENST00000509102 TNFRSF14Q92956 283 aa15.28■□□□□ 0.04
UBE3D-207ENST00000509102 OPALINQ96PE5 141 aa15.28■□□□□ 0.04
UBE3D-207ENST00000509102 MTCH1Q9NZJ7 389 aa15.28■□□□□ 0.04
UBE3D-207ENST00000509102 ZNRD1Q9P1U0 126 aa15.28■□□□□ 0.04
UBE3D-207ENST00000509102 PCDHGB5Q9Y5G0 923 aa15.28■□□□□ 0.04
UBE3D-207ENST00000509102 NBEAL1Q6ZS30 2694 aa15.27■□□□□ 0.04
UBE3D-207ENST00000509102 IGKV1-27A0A075B6S5 117 aa15.27■□□□□ 0.04
UBE3D-207ENST00000509102 IRGMA1A4Y4 181 aa15.27■□□□□ 0.04
UBE3D-207ENST00000509102 TMEM212A6NML5 194 aa15.27■□□□□ 0.04
UBE3D-207ENST00000509102 K7N7A8 449 aa15.27■□□□□ 0.04
UBE3D-207ENST00000509102 IGHA1P01876 353 aa15.27■□□□□ 0.04
UBE3D-207ENST00000509102 MDKP21741 143 aaPredicted RBP15.27■□□□□ 0.04
UBE3D-207ENST00000509102 ERVFRD-1P60508 538 aa15.27■□□□□ 0.04
UBE3D-207ENST00000509102 PRB3Q04118 309 aaPredicted RBP15.27■□□□□ 0.04
UBE3D-207ENST00000509102 MIDNQ504T8 468 aa15.27■□□□□ 0.04
UBE3D-207ENST00000509102 C17orf107Q6ZR85 190 aa15.27■□□□□ 0.04
UBE3D-207ENST00000509102 OR5R1Q8NH85 324 aa15.27■□□□□ 0.04
UBE3D-207ENST00000509102 RNF166Q96A37 237 aaPredicted RBP15.27■□□□□ 0.04
UBE3D-207ENST00000509102 ERVK13-1Q9NX77 482 aa15.27■□□□□ 0.04
UBE3D-207ENST00000509102 MYRFQ9Y2G1 1151 aa15.27■□□□□ 0.04
UBE3D-207ENST00000509102 MMP24Q9Y5R2 645 aa15.27■□□□□ 0.04
UBE3D-207ENST00000509102 OR4C45A6NMZ5 311 aa15.26■□□□□ 0.03
UBE3D-207ENST00000509102 GPR137BO60478 399 aa15.26■□□□□ 0.03
UBE3D-207ENST00000509102 NDUFA7O95182 113 aa15.26■□□□□ 0.03
UBE3D-207ENST00000509102 DLX1P56177 255 aa15.26■□□□□ 0.03
UBE3D-207ENST00000509102 LGALS4P56470 323 aa15.26■□□□□ 0.03
UBE3D-207ENST00000509102 EDDM3BP56851 147 aa15.26■□□□□ 0.03
UBE3D-207ENST00000509102 LPCAT4Q643R3 524 aa15.26■□□□□ 0.03
UBE3D-207ENST00000509102 TMEM200BQ69YZ2 307 aa15.26■□□□□ 0.03
UBE3D-207ENST00000509102 OR52I1Q8NGK6 324 aa15.26■□□□□ 0.03
UBE3D-207ENST00000509102 OR5D14Q8NGL3 314 aa15.26■□□□□ 0.03
UBE3D-207ENST00000509102 OR5AK2Q8NH90 309 aa15.26■□□□□ 0.03
UBE3D-207ENST00000509102 PPP1R35Q8TAP8 253 aa15.26■□□□□ 0.03
UBE3D-207ENST00000509102 TSEN15Q8WW01 171 aaKnown RBP15.26■□□□□ 0.03
UBE3D-207ENST00000509102 CPNE2Q96FN4 548 aaPredicted RBP15.26■□□□□ 0.03
UBE3D-207ENST00000509102 SLITRK2Q9H156 845 aa15.26■□□□□ 0.03
UBE3D-207ENST00000509102 MRPS18AQ9NVS2 196 aaKnown RBP15.26■□□□□ 0.03
UBE3D-207ENST00000509102 C1RLQ9NZP8 487 aa15.26■□□□□ 0.03
UBE3D-207ENST00000509102 TRBV2A0A0J9YWF9 115 aa15.25■□□□□ 0.03
UBE3D-207ENST00000509102 HAND1O96004 215 aa15.25■□□□□ 0.03
UBE3D-207ENST00000509102 PIPP12273 146 aaPredicted RBP15.25■□□□□ 0.03
UBE3D-207ENST00000509102 PEX2P28328 305 aa15.25■□□□□ 0.03
UBE3D-207ENST00000509102 SPIN3Q5JUX0 258 aa15.25■□□□□ 0.03
UBE3D-207ENST00000509102 TTC23Q5W5X9 447 aa15.25■□□□□ 0.03
UBE3D-207ENST00000509102 DHRS7BQ6IAN0 325 aaPredicted RBP15.25■□□□□ 0.03
UBE3D-207ENST00000509102 SERPINA12Q8IW75 414 aa15.25■□□□□ 0.03
UBE3D-207ENST00000509102 OR8H2Q8N162 312 aa15.25■□□□□ 0.03
UBE3D-207ENST00000509102 FAM58AQ8N1B3 248 aa15.25■□□□□ 0.03
UBE3D-207ENST00000509102 SETD9Q8NE22 299 aa15.25■□□□□ 0.03
UBE3D-207ENST00000509102 OR13C9Q8NGT0 318 aa15.25■□□□□ 0.03
UBE3D-207ENST00000509102 SNX22Q96L94 193 aa15.25■□□□□ 0.03
UBE3D-207ENST00000509102 ZCCHC4Q9H5U6 513 aa15.25■□□□□ 0.03
UBE3D-207ENST00000509102 ISG20L2Q9H9L3 353 aaKnown RBP15.25■□□□□ 0.03
UBE3D-207ENST00000509102 VPREB3Q9UKI3 123 aa15.25■□□□□ 0.03
UBE3D-207ENST00000509102 DHDHQ9UQ10 334 aa15.25■□□□□ 0.03
UBE3D-207ENST00000509102 IGKV1-9A0A0C4DH69 117 aa15.24■□□□□ 0.03
UBE3D-207ENST00000509102 MT-ND2P03891 347 aa15.24■□□□□ 0.03
UBE3D-207ENST00000509102 HCKP08631 526 aa15.24■□□□□ 0.03
UBE3D-207ENST00000509102 PRKACAP17612 351 aa15.24■□□□□ 0.03
UBE3D-207ENST00000509102 MYL12AP19105 171 aa15.24■□□□□ 0.03
UBE3D-207ENST00000509102 GABRR1P24046 479 aa15.24■□□□□ 0.03
UBE3D-207ENST00000509102 PDZK1IP1Q13113 114 aa15.24■□□□□ 0.03
UBE3D-207ENST00000509102 MED21Q13503 144 aa15.24■□□□□ 0.03
UBE3D-207ENST00000509102 LRRC36Q1X8D7 754 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms