RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 CDC42EP2O14613 210 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 RNF13O43567 381 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 AIREO43918 545 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 PRKYO43930 277 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 RAD1O60671 282 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF254O75437 659 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 RHBDL1O75783 438 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 SULT1C4O75897 302 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 LYPD3O95274 346 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 SERPINA3P01011 423 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 HLA-DPB1P04440 258 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 TSPAN19P0C672 248 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 ASAH2BP0C7U1 165 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 HSMCR30P0CW71 290 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 LIPCP11150 499 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 DBTP11182 482 aaKnown RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 COX6A1P12074 109 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 CD36P16671 472 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF17P17021 662 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 CNR1P21554 472 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 PCMT1P22061 227 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 CFL1P23528 166 aaKnown RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 DPP4P27487 766 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 CALRP27797 417 aaKnown RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 CRABP1P29762 137 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 FMO3P31513 532 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 OTX2P32243 289 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 S100A5P33763 92 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 SAA4P35542 130 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 UGT2B10P36537 528 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 GPR4P46093 362 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 RPS5P46782 204 aaKnown RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 POU3F4P49335 361 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 RGS6P49758 472 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 PSMD7P51665 324 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 GBX2P52951 348 aaPredicted RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 SLC25A1P53007 311 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 WNT4P56705 351 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 FBXW4P57775 412 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 MLF1P58340 268 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 SLC35A1P78382 337 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 OC90Q02509 493 aaPredicted RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 GLO1Q04760 184 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 RPL18Q07020 188 aaKnown RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 PUDPQ08623 228 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 ZP4Q12836 540 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 SELENBP1Q13228 472 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 KRR1Q13601 381 aaKnown RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 GGTLC2Q14390 218 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 BCL2A1Q16548 175 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 MOGQ16653 247 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 CNPY1Q3B7I2 92 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 ACSF3Q4G176 576 aaPredicted RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 CCDC58Q4VC31 144 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 KLHL12Q53G59 568 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 THEM4Q5T1C6 240 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 C1orf140Q5VVS0 124 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 GPR107Q5VW38 600 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 RSBN1Q5VWQ0 802 aaPredicted RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 LIPKQ5VXJ0 399 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 TMEM236Q5W0B7 351 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 TIGD3Q6B0B8 471 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 XAF1Q6GPH4 301 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 TMEM225Q6GV28 225 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 ETFRF1Q6IPR1 90 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 ACSM5Q6NUN0 579 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 FAM199XQ6PEV8 388 aaPredicted RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 CBLN3Q6UW01 205 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 APOOLQ6UXV4 268 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 WDR88Q6ZMY6 472 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 PLEKHG7Q6ZR37 379 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 OLIG3Q7RTU3 272 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 YRDCQ86U90 279 aaKnown RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 COMTD1Q86VU5 262 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 TPRA1Q86W33 373 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 CLVS1Q8IUQ0 354 aaPredicted RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 PRR22Q8IZ63 422 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 SYS1Q8N2H4 156 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 GTPBP8Q8N3Z3 284 aaPredicted RBP1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 MS4A15Q8N5U1 240 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 ARIH2OSQ8N7S6 290 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF321PQ8N8H1 164 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 GATSQ8NAP1 163 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 OR2M3Q8NG83 312 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 OR4F17Q8NGA8 305 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 OR10G3Q8NGC4 313 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 OR52E2Q8NGJ4 325 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 OR52I1Q8NGK6 324 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 OR13C2Q8NGS9 318 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 OR5J2Q8NH18 312 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 OR52N1Q8NH53 320 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 PFN4Q8NHR9 129 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF671Q8TAW3 534 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 DOK4Q8TEW6 326 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 PAQR8Q8TEZ7 354 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 CT55Q8WUE5 264 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 RNF138Q8WVD3 245 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 APH1BQ8WW43 257 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 S100ZQ8WXG8 99 aa1.89□□□□□ -2.11
TOPBP1-205ENST00000506779 ASB17Q8WXJ9 295 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms