RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 SLC19A2O60779 497 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 SS18L1O75177 396 aaPredicted RBP2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 MPDU1O75352 247 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 ETHE1O95571 254 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 EIF4EP06730 217 aaKnown RBP2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 GP1BAP07359 652 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 TACSTD2P09758 323 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 ERGP11308 486 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 CCL4P13236 92 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 ZNF17P17021 662 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 RAB5AP20339 215 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 IL32P24001 234 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 CFHR2P36980 270 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 PI4KAP42356 2102 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 UBE2AP49459 152 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 SERPINB8P50452 374 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 LHX2P50458 406 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 RAB7AP51149 207 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 ZNF138P52744 262 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 CRISP3P54108 245 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 UCNP55089 124 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 RHOAP61586 193 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 CCL7P80098 99 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 GNA12Q03113 381 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 TFDP2Q14188 446 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 GINS1Q14691 196 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 C16orf72Q14CZ0 275 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 TSC22D1Q15714 1073 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 MPPED2Q15777 294 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 IGFBP7Q16270 282 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 C5orf64Q2M2E5 130 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 CHRFAM7AQ494W8 412 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 FBXO48Q5FWF7 155 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 SLC25A25Q6KCM7 469 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 ARL9Q6T311 187 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 WDR82Q6UXN9 313 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 CBLN2Q8IUK8 224 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 PRSS58Q8IYP2 241 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 SPAG16Q8N0X2 631 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 RNF175Q8N4F7 328 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 KIF2BQ8N4N8 673 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 NPWQ8N729 165 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 OR10G4Q8NGN3 311 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 OR13C9Q8NGT0 318 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 OR8K3Q8NH51 312 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 TCP10LQ8TDR4 215 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 FAM172AQ8WUF8 416 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 LRRC29Q8WV35 223 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 RXFP2Q8WXD0 754 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 TMEM158Q8WZ71 300 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 NTAN1Q96AB6 310 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 RPEQ96AT9 228 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 EXOSC8Q96B26 276 aaKnown RBP2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 C19orf60Q96EN9 201 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 NRBF2Q96F24 287 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 RNF185Q96GF1 192 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 WFIKKN1Q96NZ8 548 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 CTRCQ99895 268 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 NAA50Q9GZZ1 169 aaKnown RBP2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 CDC42EP4Q9H3Q1 356 aaKnown RBP2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 ASB8Q9H765 288 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 ADA2Q9NZK5 511 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 RPS6KB2Q9UBS0 482 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 DNAJC12Q9UKB3 198 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 PSG8Q9UQ74 426 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 USP9YO00507 2555 aaPredicted RBP2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 PTPRBP23467 1997 aa2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 MYO18AQ92614 2054 aaKnown RBP2.19□□□□□ -2.06
TRAPPC11-205ENST00000506426 COL12A1Q99715 3063 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 IGHV3-74A0A0B4J1X5 117 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 A0A1W2PRF3 423 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 A0A1W2PRM7 423 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 OR6C74A6NCV1 312 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 ERICH4A6NGS2 130 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 SYCE1LA8MT33 242 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 F8VZ95 297 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 H3BN98 237 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 K7EM74 188 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 DFFAO00273 331 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 ERI3O43414 337 aaKnown RBP2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 CA11O75493 328 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 GABARAPO95166 117 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 HLA-DPB1P04440 258 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 LIPCP11150 499 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 CTSEP14091 401 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 GFAPP14136 432 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 RAB3AP20336 220 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 USF1P22415 310 aaPredicted RBP2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 SDC4P31431 198 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 CSNK1A1P48729 337 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 FABP6P51161 128 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 P2RX1P51575 399 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 UBE2NP61088 152 aaKnown RBP2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 ATP6V0D1P61421 351 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 PPP1CBP62140 327 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 CAPRIN1Q14444 709 aaKnown RBP2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 EXOC3L4Q17RC7 722 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 FAM83EQ2M2I3 478 aa2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 RSPO1Q2MKA7 263 aaPredicted RBP2.18□□□□□ -2.06
TRAPPC11-205ENST00000506426 BRMS1LQ5PSV4 323 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms