RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 ADI1Q9BV57 179 aa11.68□□□□□ -0.54
CDC42SE2-209ENST00000506419 FAM234AQ9H0X4 552 aa11.68□□□□□ -0.54
CDC42SE2-209ENST00000506419 TCF7L1Q9HCS4 588 aa11.68□□□□□ -0.54
CDC42SE2-209ENST00000506419 USE1Q9NZ43 259 aa11.68□□□□□ -0.54
CDC42SE2-209ENST00000506419 FRRS1LQ9P0K9 344 aa11.68□□□□□ -0.54
CDC42SE2-209ENST00000506419 IL36RNQ9UBH0 155 aa11.68□□□□□ -0.54
CDC42SE2-209ENST00000506419 GNG8Q9UK08 70 aa11.68□□□□□ -0.54
CDC42SE2-209ENST00000506419 LOC107986453A0A1B0GWG9 222 aa11.67□□□□□ -0.54
CDC42SE2-209ENST00000506419 CIB2O75838 187 aa11.67□□□□□ -0.54
CDC42SE2-209ENST00000506419 RAB13P51153 203 aa11.67□□□□□ -0.54
CDC42SE2-209ENST00000506419 OR12D2P58182 307 aa11.67□□□□□ -0.54
CDC42SE2-209ENST00000506419 CDC42P60953 191 aa11.67□□□□□ -0.54
CDC42SE2-209ENST00000506419 SNRPGP62308 76 aaKnown RBP11.67□□□□□ -0.54
CDC42SE2-209ENST00000506419 KPNB1Q14974 876 aaKnown RBP11.67□□□□□ -0.54
CDC42SE2-209ENST00000506419 HIST2H2BDQ6DRA6 164 aa11.67□□□□□ -0.54
CDC42SE2-209ENST00000506419 SLC25A26Q70HW3 274 aa11.67□□□□□ -0.54
CDC42SE2-209ENST00000506419 CCDC54Q8NEL0 328 aa11.67□□□□□ -0.54
CDC42SE2-209ENST00000506419 OR52N4Q8NGI2 321 aa11.67□□□□□ -0.54
CDC42SE2-209ENST00000506419 RFKQ969G6 155 aa11.67□□□□□ -0.54
CDC42SE2-209ENST00000506419 FGGYQ96C11 551 aa11.67□□□□□ -0.54
CDC42SE2-209ENST00000506419 RNFT2Q96EX2 444 aa11.67□□□□□ -0.54
CDC42SE2-209ENST00000506419 HRASLS5Q96KN8 279 aa11.67□□□□□ -0.54
CDC42SE2-209ENST00000506419 CHST5Q9GZS9 411 aa11.67□□□□□ -0.54
CDC42SE2-209ENST00000506419 FBLN5Q9UBX5 448 aa11.67□□□□□ -0.54
CDC42SE2-209ENST00000506419 TGP01266 2768 aa11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 A0A1W2PPH5 198 aa11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 M0QZ24 198 aa11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 EI24O14681 340 aa11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 TIMM23O14925 209 aa11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 GATBO75879 557 aaKnown RBP11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 SERPINA3P01011 423 aa11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 CALCBP10092 127 aa11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 DUSP1P28562 367 aa11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 KIR2DS4P43632 304 aa11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 AANATQ16613 207 aa11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 LRRC75BQ2VPJ9 315 aa11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 FDX2Q6P4F2 183 aa11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 TCF23Q7RTU1 214 aa11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 ASCC1Q8N9N2 400 aaKnown RBP11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 OR10AC1Q8NH08 325 aa11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 BORCS8Q96FH0 119 aa11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 SNX22Q96L94 193 aa11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 PLEKHA1Q9HB21 404 aa11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 EXOGQ9Y2C4 368 aaKnown RBP11.66□□□□□ -0.54
CDC42SE2-209ENST00000506419 SLC16A6O15403 523 aa11.65□□□□□ -0.54
CDC42SE2-209ENST00000506419 IGHA1P01876 353 aa11.65□□□□□ -0.54
CDC42SE2-209ENST00000506419 ZNF728P0DKX0 622 aa11.65□□□□□ -0.54
CDC42SE2-209ENST00000506419 GABRB1P18505 474 aa11.65□□□□□ -0.54
CDC42SE2-209ENST00000506419 ATF1P18846 271 aa11.65□□□□□ -0.54
CDC42SE2-209ENST00000506419 BCL3P20749 454 aa11.65□□□□□ -0.54
CDC42SE2-209ENST00000506419 EFNB2P52799 333 aa11.65□□□□□ -0.54
CDC42SE2-209ENST00000506419 TMEM244Q5VVB8 128 aa11.65□□□□□ -0.54
CDC42SE2-209ENST00000506419 CCBE1Q6UXH8 406 aaPredicted RBP11.65□□□□□ -0.54
CDC42SE2-209ENST00000506419 KCTD20Q7Z5Y7 419 aa11.65□□□□□ -0.54
CDC42SE2-209ENST00000506419 TPRX1Q8N7U7 411 aa11.65□□□□□ -0.54
CDC42SE2-209ENST00000506419 DNAAF1Q8NEP3 725 aa11.65□□□□□ -0.54
CDC42SE2-209ENST00000506419 C10orf35Q96D05 121 aa11.65□□□□□ -0.54
CDC42SE2-209ENST00000506419 LGALS12Q96DT0 336 aa11.65□□□□□ -0.54
CDC42SE2-209ENST00000506419 MBOAT4Q96T53 435 aa11.65□□□□□ -0.54
CDC42SE2-209ENST00000506419 SLC29A1Q99808 456 aa11.65□□□□□ -0.54
CDC42SE2-209ENST00000506419 MMP27Q9H306 513 aa11.65□□□□□ -0.54
CDC42SE2-209ENST00000506419 SEBOXQ9HB31 216 aaPredicted RBP11.65□□□□□ -0.54
CDC42SE2-209ENST00000506419 RBFOX1Q9NWB1 397 aaKnown RBP11.65□□□□□ -0.54
CDC42SE2-209ENST00000506419 IMPAD1Q9NX62 359 aa11.65□□□□□ -0.54
CDC42SE2-209ENST00000506419 IGKV1-12A0A0C4DH73 117 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 hCG_1809904A0A1W2PP81 198 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 A0A1W2PPE2 198 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 A0A1W2PR64 198 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 A0A1W2PRV1 198 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 DAPL1A0PJW8 107 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 ODF3BA8MYP8 253 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 J3QLW9 94 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 CHST1O43916 411 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 PSPNO60542 156 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 TSPAN15O95858 294 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 HAND1O96004 215 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 IGKV1D-12P01611 117 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 ISG15P05161 165 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 UBCP0CG48 685 aaKnown RBP11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 ZNF19P17023 458 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 GABRA5P31644 462 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 RBP2P50120 134 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 ALDH3A2P51648 485 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 ATP1B3P54709 279 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 MTCP1P56278 107 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 LGALS4P56470 323 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 EDDM3BP56851 147 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 PDLIM3Q53GG5 364 aaPredicted RBP11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 UTS2BQ765I0 119 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 OR8H2Q8N162 312 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 CBR4Q8N4T8 237 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 OR4S1Q8NGB4 309 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 OR51A4Q8NGJ6 313 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 FAM110DQ8TAY7 271 aaPredicted RBP11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 PP6455Q8WZ26 134 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 EMG1Q92979 244 aaKnown RBP11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 PELI1Q96FA3 418 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 ZNF649Q9BS31 505 aa11.64□□□□□ -0.55
CDC42SE2-209ENST00000506419 CHST6Q9GZX3 395 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms