RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 PRTN3P24158 256 aa12.68□□□□□ -0.38
NUP50-219ENST00000497960 NEDD8Q15843 81 aa12.68□□□□□ -0.38
NUP50-219ENST00000497960 Q499Y3 187 aa12.68□□□□□ -0.38
NUP50-219ENST00000497960 UBE2UQ5VVX9 321 aa12.68□□□□□ -0.38
NUP50-219ENST00000497960 TMEM42Q69YG0 159 aa12.68□□□□□ -0.38
NUP50-219ENST00000497960 HAGHLQ6PII5 290 aaPredicted RBP12.68□□□□□ -0.38
NUP50-219ENST00000497960 OR13C9Q8NGT0 318 aa12.68□□□□□ -0.38
NUP50-219ENST00000497960 TRMT10AQ8TBZ6 339 aaKnown RBP12.68□□□□□ -0.38
NUP50-219ENST00000497960 THRSPQ92748 146 aa12.68□□□□□ -0.38
NUP50-219ENST00000497960 TMIGD2Q96BF3 282 aa12.68□□□□□ -0.38
NUP50-219ENST00000497960 ZNF48Q96MX3 618 aaPredicted RBP12.68□□□□□ -0.38
NUP50-219ENST00000497960 WDFY2Q96P53 400 aa12.68□□□□□ -0.38
NUP50-219ENST00000497960 OR14A2Q96R54 314 aa12.68□□□□□ -0.38
NUP50-219ENST00000497960 CNTD2Q9H8S5 307 aa12.68□□□□□ -0.38
NUP50-219ENST00000497960 NLKQ9UBE8 527 aa12.68□□□□□ -0.38
NUP50-219ENST00000497960 RPUSD1Q9UJJ7 312 aaKnown RBP12.68□□□□□ -0.38
NUP50-219ENST00000497960 SLC7A11Q9UPY5 501 aa12.68□□□□□ -0.38
NUP50-219ENST00000497960 TRBV5-5A0A0J9YX44 114 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 A0A1B0GW55 424 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 DNAJC9-AS1A6NH13 148 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 OR2AT4A6NND4 320 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 FCN3O75636 299 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 RHBDL1O75783 438 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 SFTPBP07988 381 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 DUX4L2P0CJ85 424 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 DUX4L3P0CJ86 424 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 DUX4L4P0CJ87 422 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 DUX4L5P0CJ88 424 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 DUX4L6P0CJ89 424 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 DUX4L7P0CJ90 424 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 CPEP16870 476 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 MAPK3P27361 379 aaPredicted RBP12.67□□□□□ -0.38
NUP50-219ENST00000497960 ARF6P62330 175 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 RPS25P62851 125 aaKnown RBP12.67□□□□□ -0.38
NUP50-219ENST00000497960 IL13RA1P78552 427 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 GPR50Q13585 617 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 PDCD1Q15116 288 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 DUX4L9Q6RFH8 374 aaPredicted RBP12.67□□□□□ -0.38
NUP50-219ENST00000497960 BRD3OSQ6XYD6 125 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 UTS2BQ765I0 119 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 ZNF573Q86YE8 665 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 SERPINA12Q8IW75 414 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 ANGPTL6Q8NI99 470 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 AQP3Q92482 292 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 ZDHHC16Q969W1 377 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 BORCS8Q96FH0 119 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 DMRTB1Q96MA1 342 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 DUX5Q96PT3 197 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 TBX15Q96SF7 602 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 NEK6Q9HC98 313 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 TAS2R4Q9NYW5 299 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 DUX4Q9UBX2 424 aa12.67□□□□□ -0.38
NUP50-219ENST00000497960 FAM230AA0A1W2PPH8 454 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 SULT1B1O43704 296 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 MMP9P14780 707 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 ATF1P18846 271 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 AMY2BP19961 511 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 PSMA1P25786 263 aaKnown RBP12.66□□□□□ -0.38
NUP50-219ENST00000497960 GABRA2P47869 451 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 COMPP49747 757 aaPredicted RBP12.66□□□□□ -0.38
NUP50-219ENST00000497960 RPS11P62280 158 aaKnown RBP eCLIP12.66□□□□□ -0.38
NUP50-219ENST00000497960 PPP3R1P63098 170 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 TPBGQ13641 420 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 TRAM1Q15629 374 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 UBE2V2Q15819 145 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 ZNF788Q6ZQV5 615 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 CMTM4Q8IZR5 234 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 FGFRL1Q8N441 504 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 MS4A15Q8N5U1 240 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 PARP16Q8N5Y8 322 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 OR5D14Q8NGL3 314 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 H1FXQ92522 213 aaKnown RBP12.66□□□□□ -0.38
NUP50-219ENST00000497960 SLC25A28Q96A46 364 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 SIRPDQ9H106 197 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 ZCCHC4Q9H5U6 513 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 RASL12Q9NYN1 266 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 ONECUT1Q9UBC0 465 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 CKLFQ9UBR5 152 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 SLC25A10Q9UBX3 287 aaPredicted RBP12.66□□□□□ -0.38
NUP50-219ENST00000497960 POLDIP2Q9Y2S7 368 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 SOX21Q9Y651 276 aaPredicted RBP12.66□□□□□ -0.38
NUP50-219ENST00000497960 KPTNQ9Y664 436 aa12.66□□□□□ -0.38
NUP50-219ENST00000497960 CLDN34H7C241 214 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 J3QT63 122 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 SIGLEC5O15389 551 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 INMTO95050 263 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 HCKP08631 526 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 ACAA1P09110 424 aaPredicted RBP12.65□□□□□ -0.38
NUP50-219ENST00000497960 SELLP14151 372 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 NDUFB7P17568 137 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 RAB3AP20336 220 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 PRKACBP22694 351 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 AZGP1P25311 298 aaKnown RBP12.65□□□□□ -0.38
NUP50-219ENST00000497960 GABRA5P31644 462 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 HAAOP46952 286 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 FUT6P51993 359 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 SLC9A3R2Q15599 337 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 SSX1Q16384 188 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 SMIM21Q3B7S5 101 aa12.65□□□□□ -0.38
NUP50-219ENST00000497960 LHFPL2Q6ZUX7 228 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms