RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 SERPINA2P20848 420 aa12.18□□□□□ -0.46
BRCA1-223ENST00000494123 SDC2P34741 201 aa12.18□□□□□ -0.46
BRCA1-223ENST00000494123 RANBP1P43487 201 aa12.18□□□□□ -0.46
BRCA1-223ENST00000494123 GABRA2P47869 451 aa12.18□□□□□ -0.46
BRCA1-223ENST00000494123 BMXP51813 675 aa12.18□□□□□ -0.46
BRCA1-223ENST00000494123 SNU13P55769 128 aaKnown RBP12.18□□□□□ -0.46
BRCA1-223ENST00000494123 OR10A3P58181 314 aa12.18□□□□□ -0.46
BRCA1-223ENST00000494123 LOXL1Q08397 574 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-223ENST00000494123 GPR176Q14439 515 aa12.18□□□□□ -0.46
BRCA1-223ENST00000494123 RAB11BQ15907 218 aa12.18□□□□□ -0.46
BRCA1-223ENST00000494123 SLC22A6Q4U2R8 563 aa12.18□□□□□ -0.46
BRCA1-223ENST00000494123 C1orf100Q5SVJ3 147 aa12.18□□□□□ -0.46
BRCA1-223ENST00000494123 ASCL4Q6XD76 172 aa12.18□□□□□ -0.46
BRCA1-223ENST00000494123 SPNS3Q6ZMD2 512 aa12.18□□□□□ -0.46
BRCA1-223ENST00000494123 NLRC3Q7RTR2 1065 aa12.18□□□□□ -0.46
BRCA1-223ENST00000494123 LYPD6Q86Y78 171 aa12.18□□□□□ -0.46
BRCA1-223ENST00000494123 CLVS1Q8IUQ0 354 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-223ENST00000494123 MAPK1IP1LQ8NDC0 245 aa12.18□□□□□ -0.46
BRCA1-223ENST00000494123 ZNF665Q9H7R5 613 aa12.18□□□□□ -0.46
BRCA1-223ENST00000494123 CREBBPQ92793 2442 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 SLC17A2O00624 439 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 ADAM20O43506 726 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 NOL3O60936 208 aaKnown RBP12.17□□□□□ -0.46
BRCA1-223ENST00000494123 GABARAPO95166 117 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 KNG1P01042 644 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 UBBP0CG47 229 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 PSG2P11465 335 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 TGFBR1P36897 503 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 VBP1P61758 197 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 HES5Q5TA89 166 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 STUMQ69YW2 141 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 SLC36A1Q7Z2H8 476 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 OR8B3Q8NGG8 313 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 TBC1D15Q8TC07 691 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 OR8B2Q96RD0 313 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 CCL13Q99616 98 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 NAA50Q9GZZ1 169 aaKnown RBP12.17□□□□□ -0.46
BRCA1-223ENST00000494123 PATZ1Q9HBE1 687 aaKnown RBP12.17□□□□□ -0.46
BRCA1-223ENST00000494123 HMG20AQ9NP66 347 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 IL36GQ9NZH8 169 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 GHRLQ9UBU3 117 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 GLS2Q9UI32 602 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 OTOGQ6ZRI0 2925 aa12.17□□□□□ -0.46
BRCA1-223ENST00000494123 A0A096LNT2 108 aa12.16□□□□□ -0.46
BRCA1-223ENST00000494123 RFPL4AA6NLU0 287 aa12.16□□□□□ -0.46
BRCA1-223ENST00000494123 RFPL4AL1F8VTS6 287 aa12.16□□□□□ -0.46
BRCA1-223ENST00000494123 SLC22A1O15245 554 aa12.16□□□□□ -0.46
BRCA1-223ENST00000494123 TMPRSS2O15393 492 aa12.16□□□□□ -0.46
BRCA1-223ENST00000494123 IGHV2-5P01817 119 aa12.16□□□□□ -0.46
BRCA1-223ENST00000494123 FGF12P61328 243 aa12.16□□□□□ -0.46
BRCA1-223ENST00000494123 NCS1P62166 190 aa12.16□□□□□ -0.46
BRCA1-223ENST00000494123 DGUOKQ16854 277 aa12.16□□□□□ -0.46
BRCA1-223ENST00000494123 SPIN3Q5JUX0 258 aa12.16□□□□□ -0.46
BRCA1-223ENST00000494123 ELP2Q6IA86 826 aa12.16□□□□□ -0.46
BRCA1-223ENST00000494123 LYPD2Q6UXB3 125 aa12.16□□□□□ -0.46
BRCA1-223ENST00000494123 SLC16A12Q6ZSM3 486 aa12.16□□□□□ -0.46
BRCA1-223ENST00000494123 OSR2Q8N2R0 312 aa12.16□□□□□ -0.46
BRCA1-223ENST00000494123 ANGPTL6Q8NI99 470 aa12.16□□□□□ -0.46
BRCA1-223ENST00000494123 NEIL1Q96FI4 390 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-223ENST00000494123 CST11Q9H112 138 aa12.16□□□□□ -0.46
BRCA1-223ENST00000494123 DNTTIP1Q9H147 329 aa12.16□□□□□ -0.46
BRCA1-223ENST00000494123 STEAP1Q9UHE8 339 aa12.16□□□□□ -0.46
BRCA1-223ENST00000494123 IGKV1D-17A0A075B6S4 117 aa12.15□□□□□ -0.46
BRCA1-223ENST00000494123 IFITM5A6NNB3 132 aa12.15□□□□□ -0.46
BRCA1-223ENST00000494123 NOTOA8MTQ0 251 aa12.15□□□□□ -0.46
BRCA1-223ENST00000494123 CRTAPO75718 401 aaPredicted RBP12.15□□□□□ -0.46
BRCA1-223ENST00000494123 CD37P11049 281 aa12.15□□□□□ -0.46
BRCA1-223ENST00000494123 GTF2F2P13984 249 aa12.15□□□□□ -0.46
BRCA1-223ENST00000494123 ARSBP15848 533 aa12.15□□□□□ -0.46
BRCA1-223ENST00000494123 IL2RGP31785 369 aa12.15□□□□□ -0.46
BRCA1-223ENST00000494123 PRDX2P32119 198 aa12.15□□□□□ -0.46
BRCA1-223ENST00000494123 SERPINB10P48595 397 aa12.15□□□□□ -0.46
BRCA1-223ENST00000494123 P2RY14Q15391 338 aa12.15□□□□□ -0.46
BRCA1-223ENST00000494123 CIARTQ8N365 385 aaPredicted RBP12.15□□□□□ -0.46
BRCA1-223ENST00000494123 IL36RNQ9UBH0 155 aa12.15□□□□□ -0.46
BRCA1-223ENST00000494123 FLNAP21333 2647 aaKnown RBP12.15□□□□□ -0.46
BRCA1-223ENST00000494123 AIPO00170 330 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 BPNT1O95861 308 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 HAND1O96004 215 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 TFF1P04155 84 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 WNT2P09544 360 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 CLEC2LP0C7M8 214 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 CPT2P23786 658 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 DUSP1P28562 367 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 PITPNBP48739 271 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 CEBPDP49716 269 aaPredicted RBP12.15□□□□□ -0.47
BRCA1-223ENST00000494123 CAPZA1P52907 286 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 CAV3P56539 151 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 CLDN12P56749 244 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 LMO4P61968 165 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 IL13RA1P78552 427 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 CTF1Q16619 201 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 ESCO2Q56NI9 601 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 ATPAF1Q5TC12 328 aaPredicted RBP12.15□□□□□ -0.47
BRCA1-223ENST00000494123 SFXN4Q6P4A7 337 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 NR2C2APQ86WQ0 139 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 CD177Q8N6Q3 437 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 FAM216BQ8N7L0 139 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 RAB2BQ8WUD1 216 aa12.15□□□□□ -0.47
BRCA1-223ENST00000494123 MED30Q96HR3 178 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms