RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 TRRAPQ9Y4A5 3859 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 KIAA2026Q5HYC2 2103 aa8.72□□□□□ -1.01
COL6A3-214ENST00000493608 M0R1W7 72 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 SLC16A6O15403 523 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 GPR137BO60478 399 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 GATBO75879 557 aaKnown RBP8.71□□□□□ -1.02
COL6A3-214ENST00000493608 SERPINA3P01011 423 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 HTR1AP08908 422 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 UBCP0CG48 685 aaKnown RBP8.71□□□□□ -1.02
COL6A3-214ENST00000493608 CCL3L1P16619 93 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 GABRB1P18505 474 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 MPZP25189 248 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 SAA4P35542 130 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 UBE2E1P51965 193 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 FUT6P51993 359 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 ERVK11-1P61568 191 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 RPL31P62899 125 aaKnown RBP8.71□□□□□ -1.02
COL6A3-214ENST00000493608 COL10A1Q03692 680 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 ZNF91Q05481 1191 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 IL24Q13007 206 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 TMEM200BQ69YZ2 307 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 HCP5Q6MZN7 132 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 METAP1DQ6UB28 335 aaPredicted RBP8.71□□□□□ -1.02
COL6A3-214ENST00000493608 C1orf122Q6ZSJ8 110 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 SLC25A26Q70HW3 274 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 RNF144BQ7Z419 303 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 EGFL6Q8IUX8 553 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 C10orf67Q8IYJ2 551 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 PQLC1Q8N2U9 271 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 ZNF561Q8N587 486 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 ASCC1Q8N9N2 400 aaKnown RBP8.71□□□□□ -1.02
COL6A3-214ENST00000493608 OR51A4Q8NGJ6 313 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 SGMS2Q8NHU3 365 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 RHOXF1Q8NHV9 184 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 RFT1Q96AA3 541 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 PELI1Q96FA3 418 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 BORCS8Q96FH0 119 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 C4orf36Q96KX1 117 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 DMRTB1Q96MA1 342 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 PKIBQ9C010 78 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 CHST5Q9GZS9 411 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 METTL8Q9H825 291 aaKnown RBP8.71□□□□□ -1.02
COL6A3-214ENST00000493608 ISG20L2Q9H9L3 353 aaKnown RBP8.71□□□□□ -1.02
COL6A3-214ENST00000493608 HES4Q9HCC6 221 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 FAM118AQ9NWS6 357 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 IL36RNQ9UBH0 155 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 MYRFQ9Y2G1 1151 aa8.71□□□□□ -1.02
COL6A3-214ENST00000493608 TRBV23-1A0A0A0MS06 115 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 IGKV1-9A0A0C4DH69 117 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 LOC100130705A0A1B0GUX0 176 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 SPRY1O43609 319 aaPredicted RBP8.7□□□□□ -1.02
COL6A3-214ENST00000493608 ANGPTL7O43827 346 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 TK1P04183 234 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 FBP1P09467 338 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 DBTP11182 482 aaKnown RBP8.7□□□□□ -1.02
COL6A3-214ENST00000493608 ZNF20P17024 532 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 DUSP1P28562 367 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 NPBWR2P48146 333 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 POU3F4P49335 361 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 SNU13P55769 128 aaKnown RBP8.7□□□□□ -1.02
COL6A3-214ENST00000493608 RAG2P55895 527 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 MTCP1P56278 107 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 ACTC1P68032 377 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 ACTA1P68133 377 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 ZNF273Q14593 569 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 TAF9Q16594 264 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 TMEM244Q5VVB8 128 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 CDPF1Q6NVV7 123 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 KCTD20Q7Z5Y7 419 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 LDLRAD3Q86YD5 345 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 TMEM86BQ8N661 226 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 CEP19Q96LK0 163 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 SPACA5Q96QH8 159 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 ALG8Q9BVK2 526 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 ZNRD1Q9P1U0 126 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 POMT1Q9Y6A1 747 aa8.7□□□□□ -1.02
COL6A3-214ENST00000493608 SNTNA6NMZ2 147 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 OR4C45A6NMZ5 311 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 E9PI62 339 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 K7N7A8 449 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 PAHP00439 452 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 KNG1P01042 644 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 ATF1P18846 271 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 BCL3P20749 454 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 COX7A1P24310 79 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 AZGP1P25311 298 aaKnown RBP8.69□□□□□ -1.02
COL6A3-214ENST00000493608 RBP2P50120 134 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 ATP1B3P54709 279 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 EDDM3BP56851 147 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 ALKBH1Q13686 389 aaKnown RBP8.69□□□□□ -1.02
COL6A3-214ENST00000493608 GALEQ14376 348 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 CNN3Q15417 329 aaKnown RBP8.69□□□□□ -1.02
COL6A3-214ENST00000493608 SMN1Q16637 294 aaKnown RBP8.69□□□□□ -1.02
COL6A3-214ENST00000493608 LRRC36Q1X8D7 754 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 LCE3BQ5TA77 95 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 NCR3LG1Q68D85 454 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 ZNF782Q6ZMW2 699 aaPredicted RBP8.69□□□□□ -1.02
COL6A3-214ENST00000493608 C11orf42Q8N5U0 333 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 ZNF676Q8N7Q3 588 aa8.69□□□□□ -1.02
COL6A3-214ENST00000493608 TPRX1Q8N7U7 411 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms