RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 PLATP00750 562 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 UBBP0CG47 229 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 PSG2P11465 335 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 ADRA2CP18825 462 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 MYL9P24844 172 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 CFPP27918 469 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 IL2RGP31785 369 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 PITPNBP48739 271 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 FGF12P61328 243 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 IL13RA1P78552 427 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 NHLRC3Q5JS37 347 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 C1orf100Q5SVJ3 147 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 ZNF561Q8N587 486 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 JAGN1Q8N5M9 183 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 OR5D18Q8NGL1 313 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 TBC1D15Q8TC07 691 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 EMG1Q92979 244 aaKnown RBP13.2□□□□□ -0.3
TRA2A-208ENST00000490942 RFT1Q96AA3 541 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 POM121Q96HA1 1249 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 ZNF488Q96MN9 340 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 S100A13Q99584 98 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 FAM234AQ9H0X4 552 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 METTL9Q9H1A3 318 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 TXNL4BQ9NX01 149 aaKnown RBP13.2□□□□□ -0.3
TRA2A-208ENST00000490942 GLS2Q9UI32 602 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 CR1P17927 2039 aa13.2□□□□□ -0.3
TRA2A-208ENST00000490942 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.19□□□□□ -0.38e-14■■■□□ 14.8
TRA2A-208ENST00000490942 CSPG4Q6UVK1 2322 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 IGKV1D-17A0A075B6S4 117 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 IGHV3OR15-7A0A075B7D8 119 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 TRAV20A0A0B4J274 112 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 FAM157AC9JC47 383 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 TMPRSS2O15393 492 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 ADAM20O43506 726 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 ANGPTL7O43827 346 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 ECDO95905 644 aaPredicted RBP13.19□□□□□ -0.3
TRA2A-208ENST00000490942 GYPAP02724 150 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 SFTPBP07988 381 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 MSMBP08118 114 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 AMY2BP19961 511 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 BCL3P20749 454 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 GATA3P23771 443 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 PRDX2P32119 198 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 OR3A4PP47883 348 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 NPBWR2P48146 333 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 CAPZA1P52907 286 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 DVL1P1P54792 670 aaPredicted RBP13.19□□□□□ -0.3
TRA2A-208ENST00000490942 KRTAP1-1Q07627 177 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 RSU1Q15404 277 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 CD276Q5ZPR3 534 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 ZNF841Q6ZN19 808 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 RNF144BQ7Z419 303 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 TPRA1Q86W33 373 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 MAPK1IP1LQ8NDC0 245 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 C19orf18Q8NEA5 215 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 OR51T1Q8NGJ9 327 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 OR6M1Q8NGM8 313 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 OR13F1Q8NGS4 319 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 MSI2Q96DH6 328 aaKnown RBP13.19□□□□□ -0.3
TRA2A-208ENST00000490942 YIPF6Q96EC8 236 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 KCTD7Q96MP8 289 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 SSBP3Q9BWW4 388 aaPredicted RBP13.19□□□□□ -0.3
TRA2A-208ENST00000490942 CNTD2Q9H8S5 307 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 CLN8Q9UBY8 286 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 ABCA1O95477 2261 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 MED13LQ71F56 2210 aa13.19□□□□□ -0.3
TRA2A-208ENST00000490942 RFPL4AA6NLU0 287 aa13.18□□□□□ -0.3
TRA2A-208ENST00000490942 RFPL4AL1F8VTS6 287 aa13.18□□□□□ -0.3
TRA2A-208ENST00000490942 F8VVB4 439 aa13.18□□□□□ -0.3
TRA2A-208ENST00000490942 F8VWA3 439 aa13.18□□□□□ -0.3
TRA2A-208ENST00000490942 NDUFB3O43676 98 aa13.18□□□□□ -0.3
TRA2A-208ENST00000490942 TMEM127O75204 238 aa13.18□□□□□ -0.3
TRA2A-208ENST00000490942 CHRM2P08172 466 aa13.18□□□□□ -0.3
TRA2A-208ENST00000490942 RBMXP38159 391 aaKnown RBP13.18□□□□□ -0.3
TRA2A-208ENST00000490942 GNB2P62879 340 aa13.18□□□□□ -0.3
TRA2A-208ENST00000490942 HOXA4Q00056 320 aaPredicted RBP13.18□□□□□ -0.3
TRA2A-208ENST00000490942 IL13RA2Q14627 380 aa13.18□□□□□ -0.3
TRA2A-208ENST00000490942 LRRC10Q5BKY1 277 aa13.18□□□□□ -0.3
TRA2A-208ENST00000490942 WDR25Q64LD2 544 aaPredicted RBP13.18□□□□□ -0.3
TRA2A-208ENST00000490942 LYPD2Q6UXB3 125 aa13.18□□□□□ -0.3
TRA2A-208ENST00000490942 LINC00596Q86U02 117 aa13.18□□□□□ -0.3
TRA2A-208ENST00000490942 SEH1LQ96EE3 360 aa13.18□□□□□ -0.3
TRA2A-208ENST00000490942 GAFA1Q96PS6 74 aa13.18□□□□□ -0.3
TRA2A-208ENST00000490942 CCL13Q99616 98 aa13.18□□□□□ -0.3
TRA2A-208ENST00000490942 FAM192AQ9GZU8 254 aa13.18□□□□□ -0.3
TRA2A-208ENST00000490942 RBFOX1Q9NWB1 397 aaKnown RBP13.18□□□□□ -0.3
TRA2A-208ENST00000490942 CTSZQ9UBR2 303 aa13.18□□□□□ -0.3
TRA2A-208ENST00000490942 MRPS28Q9Y2Q9 187 aaKnown RBP13.18□□□□□ -0.3
TRA2A-208ENST00000490942 VPS13CQ709C8 3753 aa13.18□□□□□ -0.3
TRA2A-208ENST00000490942 KIAA1324LA8MWY0 1029 aaPredicted RBP13.17□□□□□ -0.3
TRA2A-208ENST00000490942 H3BUI4 141 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 SLC17A2O00624 439 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 SLC22A1O15245 554 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 CSTBP04080 98 aaKnown RBP13.17□□□□□ -0.3
TRA2A-208ENST00000490942 TFAP2AP05549 437 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 GTF2F2P13984 249 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 GADD45AP24522 165 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 LMO1P25800 156 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 ALDH3B2P48448 385 aa13.17□□□□□ -0.3
TRA2A-208ENST00000490942 CAV3P56539 151 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms