RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 EMG1Q92979 244 aaKnown RBP14.52□□□□□ -0.09
ITGB1-215ENST00000488494 RDH12Q96NR8 316 aa14.52□□□□□ -0.09
ITGB1-215ENST00000488494 MYCBPQ99417 103 aaPredicted RBP14.52□□□□□ -0.09
ITGB1-215ENST00000488494 INPP5EQ9NRR6 644 aa14.52□□□□□ -0.09
ITGB1-215ENST00000488494 ZNRD1Q9P1U0 126 aa14.52□□□□□ -0.09
ITGB1-215ENST00000488494 IL36RNQ9UBH0 155 aa14.52□□□□□ -0.09
ITGB1-215ENST00000488494 RPL36Q9Y3U8 105 aaKnown RBP14.52□□□□□ -0.09
ITGB1-215ENST00000488494 MEIOCA2RUB1 952 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 GPR137BO60478 399 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 PAHP00439 452 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 CRYBA1P05813 215 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 OCM2P0CE71 109 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 OCMP0CE72 109 aaPredicted RBP14.51□□□□□ -0.09
ITGB1-215ENST00000488494 ATF1P18846 271 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 PRKACBP22694 351 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 IER3P46695 156 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 UBE2E1P51965 193 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 ATP1B3P54709 279 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 RAG2P55895 527 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 MTCP1P56278 107 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 COL10A1Q03692 680 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 ZNF273Q14593 569 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 SMN1Q16637 294 aaKnown RBP14.51□□□□□ -0.09
ITGB1-215ENST00000488494 LRRC36Q1X8D7 754 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 TMEM200BQ69YZ2 307 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 HCP5Q6MZN7 132 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 SHISA2Q6UWI4 295 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 OR13C9Q8NGT0 318 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 RFT1Q96AA3 541 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 SPSB1Q96BD6 273 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 OPALINQ96PE5 141 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 ZNF649Q9BS31 505 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 FAM234AQ9H0X4 552 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 RBFOX1Q9NWB1 397 aaKnown RBP14.51□□□□□ -0.09
ITGB1-215ENST00000488494 C1RLQ9NZP8 487 aa14.51□□□□□ -0.09
ITGB1-215ENST00000488494 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.51□□□□□ -0.09
ITGB1-215ENST00000488494 A0A1W2PPH5 198 aa14.5□□□□□ -0.09
ITGB1-215ENST00000488494 E9PI62 339 aa14.5□□□□□ -0.09
ITGB1-215ENST00000488494 WBP4O75554 376 aaKnown RBP14.5□□□□□ -0.09
ITGB1-215ENST00000488494 CYB5AP00167 134 aa14.5□□□□□ -0.09
ITGB1-215ENST00000488494 CCL3L1P16619 93 aa14.5□□□□□ -0.09
ITGB1-215ENST00000488494 PEX2P28328 305 aa14.5□□□□□ -0.09
ITGB1-215ENST00000488494 RELBQ01201 579 aa14.5□□□□□ -0.09
ITGB1-215ENST00000488494 LHFPL2Q6ZUX7 228 aa14.5□□□□□ -0.09
ITGB1-215ENST00000488494 EGFL6Q8IUX8 553 aa14.5□□□□□ -0.09
ITGB1-215ENST00000488494 MKXQ8IYA7 352 aa14.5□□□□□ -0.09
ITGB1-215ENST00000488494 Q8IYB0 196 aa14.5□□□□□ -0.09
ITGB1-215ENST00000488494 OR4F5Q8NH21 305 aa14.5□□□□□ -0.09
ITGB1-215ENST00000488494 DYRK2Q92630 601 aa14.5□□□□□ -0.09
ITGB1-215ENST00000488494 DPAGT1Q9H3H5 408 aa14.5□□□□□ -0.09
ITGB1-215ENST00000488494 PKD1L1Q8TDX9 2849 aa14.5□□□□□ -0.09
ITGB1-215ENST00000488494 TRBV2A0A0J9YWF9 115 aa14.49□□□□□ -0.09
ITGB1-215ENST00000488494 MEX3AA1L020 520 aaKnown RBP14.49□□□□□ -0.09
ITGB1-215ENST00000488494 BTBD17A6NE02 478 aa14.49□□□□□ -0.09
ITGB1-215ENST00000488494 K7N7A8 449 aa14.49□□□□□ -0.09
ITGB1-215ENST00000488494 SPRY1O43609 319 aaPredicted RBP14.49□□□□□ -0.09
ITGB1-215ENST00000488494 ZNF737O75373 536 aa14.49□□□□□ -0.09
ITGB1-215ENST00000488494 ZFPL1O95159 310 aa14.49□□□□□ -0.09
ITGB1-215ENST00000488494 CLIC3O95833 236 aa14.49□□□□□ -0.09
ITGB1-215ENST00000488494 HAND1O96004 215 aa14.49□□□□□ -0.09
ITGB1-215ENST00000488494 BCL3P20749 454 aa14.49□□□□□ -0.09
ITGB1-215ENST00000488494 NPBWR2P48146 333 aa14.49□□□□□ -0.09
ITGB1-215ENST00000488494 SNU13P55769 128 aaKnown RBP14.49□□□□□ -0.09
ITGB1-215ENST00000488494 EDDM3BP56851 147 aa14.49□□□□□ -0.09
ITGB1-215ENST00000488494 ACSM1Q08AH1 577 aa14.49□□□□□ -0.09
ITGB1-215ENST00000488494 RCN1Q15293 331 aa14.49□□□□□ -0.09
ITGB1-215ENST00000488494 TAF9Q16594 264 aa14.49□□□□□ -0.09
ITGB1-215ENST00000488494 LPCAT4Q643R3 524 aa14.49□□□□□ -0.09
ITGB1-215ENST00000488494 OR5D18Q8NGL1 313 aa14.49□□□□□ -0.09
ITGB1-215ENST00000488494 CNIH3Q8TBE1 160 aa14.49□□□□□ -0.09
ITGB1-215ENST00000488494 CYGBQ8WWM9 190 aa14.49□□□□□ -0.09
ITGB1-215ENST00000488494 SPACA5Q96QH8 159 aa14.49□□□□□ -0.09
ITGB1-215ENST00000488494 PDCD1LG2Q9BQ51 273 aa14.49□□□□□ -0.09
ITGB1-215ENST00000488494 MRPS18AQ9NVS2 196 aaKnown RBP14.49□□□□□ -0.09
ITGB1-215ENST00000488494 TMEM212A6NML5 194 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 NDUFA7O95182 113 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 CHRM2P08172 466 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 CCDC159P0C7I6 412 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 LIMS3P0CW19 117 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 LIMS4P0CW20 117 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 CALCBP10092 127 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 PRKACAP17612 351 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 COX7A1P24310 79 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 GBX2P52951 348 aaPredicted RBP14.48□□□□□ -0.09
ITGB1-215ENST00000488494 RPL15P61313 204 aaKnown RBP14.48□□□□□ -0.09
ITGB1-215ENST00000488494 MRPL28Q13084 256 aaKnown RBP14.48□□□□□ -0.09
ITGB1-215ENST00000488494 EDDM3AQ14507 147 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 MIDNQ504T8 468 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 ZNF691Q5VV52 312 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 ZNF782Q6ZMW2 699 aaPredicted RBP14.48□□□□□ -0.09
ITGB1-215ENST00000488494 GDPD3Q7L5L3 318 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 OR8H2Q8N162 312 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 OR5AK2Q8NH90 309 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 SGMS2Q8NHU3 365 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 TSEN15Q8WW01 171 aaKnown RBP14.48□□□□□ -0.09
ITGB1-215ENST00000488494 C17orf50Q8WW18 174 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 COMMD4Q9H0A8 199 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 NEK6Q9HC98 313 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 VPREB3Q9UKI3 123 aa14.48□□□□□ -0.09
ITGB1-215ENST00000488494 SF3B6Q9Y3B4 125 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms