RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 PCYT1BQ9Y5K3 369 aaPredicted RBP2.37□□□□□ -2.03
ITGB1-214ENST00000488427 RFNGQ9Y644 331 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 DNAH7Q8WXX0 4024 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 HEATR5BQ9P2D3 2071 aa2.37□□□□□ -2.03
ITGB1-214ENST00000488427 KIAA2026Q5HYC2 2103 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 TRGV5A0A0B4J1U4 118 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 IGKV1D-13A0A0B4J2D9 117 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 CXorf51AA0A1B0GTR3 108 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 A0A1B0GVL5 298 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 ZNF726A6NNF4 738 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 CD160O95971 181 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 CD8AP01732 235 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 ADRA2AP08913 450 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 C1GALT1C1LP0DN25 315 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 IGKV1-13P0DP09 117 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 ZNF14P17017 642 aaPredicted RBP2.36□□□□□ -2.03
ITGB1-214ENST00000488427 CD79BP40259 229 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 RHOAP61586 193 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 ESRRGP62508 458 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 INCA1Q0VD86 236 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 SNRNP35Q16560 246 aaKnown RBP2.36□□□□□ -2.03
ITGB1-214ENST00000488427 POU2AF1Q16633 256 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 PGGHGQ32M88 737 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 CCNJQ5T5M9 372 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 ANKRD22Q5VYY1 191 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 OR2A2Q6IF42 318 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 TEX43Q6ZNM6 134 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 CALHM3Q86XJ0 350 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 CALHM1Q8IU99 346 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 C15orf56Q8N910 161 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 BHLHE23Q8NDY6 225 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 OR52M1Q8NGK5 317 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 RHEBL1Q8TAI7 183 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 NTAN1Q96AB6 310 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 RMI2Q96E14 147 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 COX14Q96I36 57 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 TSGA13Q96PP4 275 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 DOK1Q99704 481 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 CHAC1Q9BUX1 264 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 RPF2Q9H7B2 306 aaKnown RBP2.36□□□□□ -2.03
ITGB1-214ENST00000488427 LRRC40Q9H9A6 602 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 IMP3Q9NV31 184 aaKnown RBP2.36□□□□□ -2.03
ITGB1-214ENST00000488427 UVRAGQ9P2Y5 699 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 HPCAL4Q9UM19 191 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 ARHGAP32A7KAX9 2087 aa2.36□□□□□ -2.03
ITGB1-214ENST00000488427 IGLV3-12A0A075B6K2 115 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 TRAV6A0A075B6T7 132 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 SYNJ2BP-COX16A0A087WUM0 186 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 A0A1B0GVX0 72 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 CLPSL1A2RUU4 121 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 CLOCKO15516 846 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 SOD1P00441 154 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 IL4P05112 153 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 CD5P06127 495 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 OR56A5P0C7T3 313 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 NCK1P16333 377 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 UGT2B10P36537 528 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 CDKN2BP42772 138 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 GBX2P52951 348 aaPredicted RBP2.35□□□□□ -2.03
ITGB1-214ENST00000488427 GNA12Q03113 381 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 BAMBIQ13145 260 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 PON3Q15166 354 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 C6orf226Q5I0X4 101 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 AP1ARQ63HQ0 302 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 SAXO2Q658L1 398 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 PSTKQ8IV42 348 aaKnown RBP2.35□□□□□ -2.03
ITGB1-214ENST00000488427 RIMKLAQ8IXN7 391 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 ZNF679Q8IYX0 411 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 STPG2Q8N412 459 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 SIGLECL1Q8N7X8 197 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 OR1L4Q8NGR5 311 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 RAB3IL1Q8TBN0 382 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 C22orf15Q8WYQ4 148 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 TRIM44Q96DX7 344 aaPredicted RBP2.35□□□□□ -2.03
ITGB1-214ENST00000488427 ZFP3Q96NJ6 502 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 SULT4A1Q9BR01 284 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 TTTY12Q9BZ98 90 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 FAM60AQ9NP50 221 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 COX16Q9P0S2 106 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 BLOC1S6Q9UL45 172 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 TMED5Q9Y3A6 229 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 DNAH3Q8TD57 4116 aa2.35□□□□□ -2.03
ITGB1-214ENST00000488427 COLCA2A8K830 154 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 B4DSR2 109 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 PSMD11O00231 422 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 GOSR2O14653 212 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 CRYBA1P05813 215 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 BCHEP06276 602 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 ZNF7P17097 686 aaPredicted RBP2.34□□□□□ -2.03
ITGB1-214ENST00000488427 RAB3BP20337 219 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 PTNP21246 168 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 F2RP25116 425 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 HRH1P35367 487 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 EFNA4P52798 201 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 KCNJ2P63252 427 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 BST2Q10589 180 aaKnown RBP2.34□□□□□ -2.03
ITGB1-214ENST00000488427 ECH1Q13011 328 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 DNLZQ5SXM8 178 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 SYPL2Q5VXT5 272 aa2.34□□□□□ -2.03
ITGB1-214ENST00000488427 SLC25A48Q6ZT89 311 aaKnown RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms