RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 OR3A4PP47883 348 aa11.12□□□□□ -0.63
COL4A6-207ENST00000487645 MTNR1BP49286 362 aa11.12□□□□□ -0.63
COL4A6-207ENST00000487645 GMFBP60983 142 aa11.12□□□□□ -0.63
COL4A6-207ENST00000487645 ZNF146Q15072 292 aa11.12□□□□□ -0.63
COL4A6-207ENST00000487645 RSU1Q15404 277 aa11.12□□□□□ -0.63
COL4A6-207ENST00000487645 STUMQ69YW2 141 aa11.12□□□□□ -0.63
COL4A6-207ENST00000487645 FIP1L1Q6UN15 594 aaKnown RBP11.12□□□□□ -0.63
COL4A6-207ENST00000487645 GPR141Q7Z602 305 aa11.12□□□□□ -0.63
COL4A6-207ENST00000487645 ANKRD13BQ86YJ7 626 aa11.12□□□□□ -0.63
COL4A6-207ENST00000487645 CIARTQ8N365 385 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-207ENST00000487645 OR5T2Q8NGG2 359 aa11.12□□□□□ -0.63
COL4A6-207ENST00000487645 ANGPTL6Q8NI99 470 aa11.12□□□□□ -0.63
COL4A6-207ENST00000487645 TBC1D15Q8TC07 691 aa11.12□□□□□ -0.63
COL4A6-207ENST00000487645 SEH1LQ96EE3 360 aa11.12□□□□□ -0.63
COL4A6-207ENST00000487645 NEIL1Q96FI4 390 aaPredicted RBP11.12□□□□□ -0.63
COL4A6-207ENST00000487645 MED30Q96HR3 178 aa11.12□□□□□ -0.63
COL4A6-207ENST00000487645 C18orf12Q96KH6 178 aa11.12□□□□□ -0.63
COL4A6-207ENST00000487645 COX4I2Q96KJ9 171 aa11.12□□□□□ -0.63
COL4A6-207ENST00000487645 FAM192AQ9GZU8 254 aa11.12□□□□□ -0.63
COL4A6-207ENST00000487645 NARFLQ9H6Q4 476 aa11.12□□□□□ -0.63
COL4A6-207ENST00000487645 MRPS28Q9Y2Q9 187 aaKnown RBP11.12□□□□□ -0.63
COL4A6-207ENST00000487645 AK6Q9Y3D8 172 aaKnown RBP11.12□□□□□ -0.63
COL4A6-207ENST00000487645 V9GY05 133 aa11.12□□□□□ -0.63
COL4A6-207ENST00000487645 HIVEP1P15822 2718 aa11.12□□□□□ -0.63
COL4A6-207ENST00000487645 ARHGAP32A7KAX9 2087 aa11.12□□□□□ -0.63
COL4A6-207ENST00000487645 ABCA1O95477 2261 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.11□□□□□ -0.63
COL4A6-207ENST00000487645 SHISA3A0PJX4 238 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 RFPL4AA6NLU0 287 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 RFPL4AL1F8VTS6 287 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 SLC22A1O15245 554 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 SFTPBP07988 381 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 UBBP0CG47 229 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 CD99P14209 185 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 RAB3BP20337 219 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 PRDX2P32119 198 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 FGF12P61328 243 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 SPIN3Q5JUX0 258 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 FAM166AQ6J272 317 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 LYPD2Q6UXB3 125 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 ZNF788Q6ZQV5 615 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 NLRC3Q7RTR2 1065 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 SLC36A1Q7Z2H8 476 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 OR4D6Q8NGJ1 314 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 OR6M1Q8NGM8 313 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 EMG1Q92979 244 aaKnown RBP11.11□□□□□ -0.63
COL4A6-207ENST00000487645 MRPS24Q96EL2 167 aaKnown RBP11.11□□□□□ -0.63
COL4A6-207ENST00000487645 GFI1Q99684 422 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 CENPOQ9BU64 300 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 ELL3Q9HB65 397 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-207ENST00000487645 RBFOX1Q9NWB1 397 aaKnown RBP11.11□□□□□ -0.63
COL4A6-207ENST00000487645 GLS2Q9UI32 602 aa11.11□□□□□ -0.63
COL4A6-207ENST00000487645 ZNF469Q96JG9 3925 aaPredicted RBP11.11□□□□□ -0.63
COL4A6-207ENST00000487645 IGKV1D-17A0A075B6S4 117 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 SLC17A2O00624 439 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 SH2D1BO14796 132 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 ADAM20O43506 726 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 CDRT1O95170 752 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 CSTBP04080 98 aaKnown RBP11.1□□□□□ -0.63
COL4A6-207ENST00000487645 RPS2P15880 293 aaKnown RBP11.1□□□□□ -0.63
COL4A6-207ENST00000487645 PRKACAP17612 351 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 AMY2BP19961 511 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 CFPP27918 469 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 HTR2CP28335 458 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 GZMKP49863 264 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 NPY4RP50391 375 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 TMEM249Q2WGJ8 235 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 C11orf91Q3C1V1 193 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 GLIPR1L1Q6UWM5 242 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 MAPK1IP1LQ8NDC0 245 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 OR8B3Q8NGG8 313 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 OR51T1Q8NGJ9 327 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 SDSLQ96GA7 329 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 POM121Q96HA1 1249 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 OR8B2Q96RD0 313 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 CCL13Q99616 98 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 NKX3-1Q99801 234 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-207ENST00000487645 PLGRKTQ9HBL7 147 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 ZNF222Q9UK12 451 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 ACANP16112 2415 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 WNK2Q9Y3S1 2297 aa11.1□□□□□ -0.63
COL4A6-207ENST00000487645 ABCA2Q9BZC7 2435 aa11.09□□□□□ -0.63
COL4A6-207ENST00000487645 DSCAML1Q8TD84 2053 aa11.09□□□□□ -0.63
COL4A6-207ENST00000487645 NKX6-3A6NJ46 265 aa11.09□□□□□ -0.63
COL4A6-207ENST00000487645 B4DSR2 109 aa11.09□□□□□ -0.63
COL4A6-207ENST00000487645 SMAD7O15105 426 aaKnown RBP11.09□□□□□ -0.63
COL4A6-207ENST00000487645 SIGLEC5O15389 551 aa11.09□□□□□ -0.63
COL4A6-207ENST00000487645 TMPRSS2O15393 492 aa11.09□□□□□ -0.63
COL4A6-207ENST00000487645 HTR3BO95264 441 aa11.09□□□□□ -0.63
COL4A6-207ENST00000487645 CHRM2P08172 466 aa11.09□□□□□ -0.63
COL4A6-207ENST00000487645 INHBBP09529 407 aa11.09□□□□□ -0.63
COL4A6-207ENST00000487645 GTF2F2P13984 249 aa11.09□□□□□ -0.63
COL4A6-207ENST00000487645 IL2RGP31785 369 aa11.09□□□□□ -0.63
COL4A6-207ENST00000487645 SDC2P34741 201 aa11.09□□□□□ -0.63
COL4A6-207ENST00000487645 GABRA2P47869 451 aa11.09□□□□□ -0.63
COL4A6-207ENST00000487645 CAPZA1P52907 286 aa11.09□□□□□ -0.63
COL4A6-207ENST00000487645 IL13RA1P78552 427 aa11.09□□□□□ -0.63
COL4A6-207ENST00000487645 DGUOKQ16854 277 aa11.09□□□□□ -0.63
COL4A6-207ENST00000487645 SLC22A6Q4U2R8 563 aa11.09□□□□□ -0.63
COL4A6-207ENST00000487645 ESCO2Q56NI9 601 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms