RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 PCDHB16Q9NRJ7 776 aa22.64■■□□□ 1.21
HLA-C-208ENST00000487245 SLC7A11Q9UPY5 501 aa22.64■■□□□ 1.21
HLA-C-208ENST00000487245 ATP6V1G2-DDX39BF2Z307 99 aa22.63■■□□□ 1.21
HLA-C-208ENST00000487245 MT-CO3P00414 261 aa22.63■■□□□ 1.21
HLA-C-208ENST00000487245 KNG1P01042 644 aa22.63■■□□□ 1.21
HLA-C-208ENST00000487245 H2AFB1P0C5Y9 115 aa22.63■■□□□ 1.21
HLA-C-208ENST00000487245 PATE4P0C8F1 98 aa22.63■■□□□ 1.21
HLA-C-208ENST00000487245 HKR1P10072 659 aa22.63■■□□□ 1.21
HLA-C-208ENST00000487245 CHATP28329 748 aa22.63■■□□□ 1.21
HLA-C-208ENST00000487245 IP6K3Q96PC2 410 aa22.63■■□□□ 1.21
HLA-C-208ENST00000487245 NECAP2Q9NVZ3 263 aa22.63■■□□□ 1.21
HLA-C-208ENST00000487245 IGKV1-27A0A075B6S5 117 aa22.62■■□□□ 1.21
HLA-C-208ENST00000487245 hCG_38984A0A1B0GV85 526 aa22.62■■□□□ 1.21
HLA-C-208ENST00000487245 F10P00742 488 aa22.62■■□□□ 1.21
HLA-C-208ENST00000487245 MMP7P09237 267 aaPredicted RBP22.62■■□□□ 1.21
HLA-C-208ENST00000487245 LHX2P50458 406 aa22.62■■□□□ 1.21
HLA-C-208ENST00000487245 FUT6P51993 359 aa22.62■■□□□ 1.21
HLA-C-208ENST00000487245 RSPO4Q2I0M5 234 aaPredicted RBP22.62■■□□□ 1.21
HLA-C-208ENST00000487245 MYO7BQ6PIF6 2116 aa22.62■■□□□ 1.21
HLA-C-208ENST00000487245 FNDC9Q8TBE3 224 aa22.62■■□□□ 1.21
HLA-C-208ENST00000487245 AK3Q9UIJ7 227 aa22.62■■□□□ 1.21
HLA-C-208ENST00000487245 PRELID1Q9Y255 219 aa22.62■■□□□ 1.21
HLA-C-208ENST00000487245 WDR87Q6ZQQ6 2873 aa22.62■■□□□ 1.21
HLA-C-208ENST00000487245 SYNGR4O95473 234 aa22.62■■□□□ 1.21
HLA-C-208ENST00000487245 GAPDHP04406 335 aaKnown RBP22.62■■□□□ 1.21
HLA-C-208ENST00000487245 OR5H8P0DN80 308 aa22.62■■□□□ 1.21
HLA-C-208ENST00000487245 ADCYAP1P18509 176 aa22.62■■□□□ 1.21
HLA-C-208ENST00000487245 IAH1Q2TAA2 248 aaPredicted RBP22.62■■□□□ 1.21
HLA-C-208ENST00000487245 OR4A4PQ8NGN8 299 aa22.62■■□□□ 1.21
HLA-C-208ENST00000487245 SIGLEC12Q96PQ1 595 aa22.62■■□□□ 1.21
HLA-C-208ENST00000487245 HDHD3Q9BSH5 251 aaPredicted RBP22.62■■□□□ 1.21
HLA-C-208ENST00000487245 PRDM14Q9GZV8 571 aa22.62■■□□□ 1.21
HLA-C-208ENST00000487245 GSKIPQ9P0R6 139 aa22.62■■□□□ 1.21
HLA-C-208ENST00000487245 IFNA21P01568 189 aa22.61■■□□□ 1.21
HLA-C-208ENST00000487245 SFTPBP07988 381 aa22.61■■□□□ 1.21
HLA-C-208ENST00000487245 S100A10P60903 97 aa22.61■■□□□ 1.21
HLA-C-208ENST00000487245 FAM3AP98173 230 aa22.61■■□□□ 1.21
HLA-C-208ENST00000487245 OR8B8Q15620 311 aa22.61■■□□□ 1.21
HLA-C-208ENST00000487245 TSPO2Q5TGU0 170 aa22.61■■□□□ 1.21
HLA-C-208ENST00000487245 BOLLQ8N9W6 283 aaKnown RBP22.61■■□□□ 1.21
HLA-C-208ENST00000487245 FGFBP3Q8TAT2 258 aa22.61■■□□□ 1.21
HLA-C-208ENST00000487245 POM121Q96HA1 1249 aa22.61■■□□□ 1.21
HLA-C-208ENST00000487245 FAAP24Q9BTP7 215 aa22.61■■□□□ 1.21
HLA-C-208ENST00000487245 DOCK10Q96BY6 2186 aa22.61■■□□□ 1.21
HLA-C-208ENST00000487245 FCGR3AP08637 254 aa22.6■■□□□ 1.21
HLA-C-208ENST00000487245 OR1C1Q15619 314 aa22.6■■□□□ 1.21
HLA-C-208ENST00000487245 DCAF10Q5QP82 559 aa22.6■■□□□ 1.21
HLA-C-208ENST00000487245 PUSL1Q8N0Z8 303 aaKnown RBP22.6■■□□□ 1.21
HLA-C-208ENST00000487245 SPSB4Q96A44 273 aa22.6■■□□□ 1.21
HLA-C-208ENST00000487245 GALNT14Q96FL9 552 aa22.6■■□□□ 1.21
HLA-C-208ENST00000487245 CMSS1Q9BQ75 279 aaKnown RBP22.6■■□□□ 1.21
HLA-C-208ENST00000487245 C1QTNF5Q9BXJ0 243 aa22.6■■□□□ 1.21
HLA-C-208ENST00000487245 ZNF816-ZNF321PA0A0X1KG74 233 aa22.6■■□□□ 1.21
HLA-C-208ENST00000487245 A0A1W2PNU3 283 aaPredicted RBP22.6■■□□□ 1.21
HLA-C-208ENST00000487245 ZNF705EA8MWA4 302 aaPredicted RBP22.6■■□□□ 1.21
HLA-C-208ENST00000487245 RPL36A-HNRNPH2H7BZ11 118 aa22.6■■□□□ 1.21
HLA-C-208ENST00000487245 DEDDO75618 318 aa22.6■■□□□ 1.21
HLA-C-208ENST00000487245 CST4P01036 141 aa22.6■■□□□ 1.21
HLA-C-208ENST00000487245 PMELP40967 661 aa22.6■■□□□ 1.21
HLA-C-208ENST00000487245 TAF9Q16594 264 aa22.6■■□□□ 1.21
HLA-C-208ENST00000487245 TMEM268Q5VZI3 342 aa22.6■■□□□ 1.21
HLA-C-208ENST00000487245 RNF122Q9H9V4 155 aa22.6■■□□□ 1.21
HLA-C-208ENST00000487245 BCO1Q9HAY6 547 aa22.6■■□□□ 1.21
HLA-C-208ENST00000487245 SPEGQ15772 3267 aa22.59■■□□□ 1.21
HLA-C-208ENST00000487245 SPRY1O43609 319 aaPredicted RBP22.59■■□□□ 1.21
HLA-C-208ENST00000487245 ANGPTL7O43827 346 aa22.59■■□□□ 1.21
HLA-C-208ENST00000487245 ITGA3P26006 1051 aa22.59■■□□□ 1.21
HLA-C-208ENST00000487245 CLDN18P56856 261 aa22.59■■□□□ 1.21
HLA-C-208ENST00000487245 ZNF92Q03936 586 aa22.59■■□□□ 1.21
HLA-C-208ENST00000487245 SMCO1Q147U7 214 aa22.59■■□□□ 1.21
HLA-C-208ENST00000487245 LRTM2Q8N967 370 aa22.59■■□□□ 1.21
HLA-C-208ENST00000487245 SEC11CQ9BY50 192 aa22.59■■□□□ 1.21
HLA-C-208ENST00000487245 ACKR4Q9NPB9 350 aa22.59■■□□□ 1.21
HLA-C-208ENST00000487245 MYO15AQ9UKN7 3530 aa22.58■■□□□ 1.21
HLA-C-208ENST00000487245 CDX4O14627 284 aaPredicted RBP22.58■■□□□ 1.21
HLA-C-208ENST00000487245 ARHGDIBP52566 201 aa22.58■■□□□ 1.21
HLA-C-208ENST00000487245 SPEM2Q0P670 501 aa22.58■■□□□ 1.21
HLA-C-208ENST00000487245 GGNBP1Q5YKI7 109 aa22.58■■□□□ 1.21
HLA-C-208ENST00000487245 TMEM200AQ86VY9 491 aa22.58■■□□□ 1.21
HLA-C-208ENST00000487245 SULT4A1Q9BR01 284 aa22.58■■□□□ 1.21
HLA-C-208ENST00000487245 TAF9BQ9HBM6 251 aa22.58■■□□□ 1.21
HLA-C-208ENST00000487245 KCNIP3Q9Y2W7 256 aa22.58■■□□□ 1.21
HLA-C-208ENST00000487245 ZDBF2Q9HCK1 2354 aa22.58■■□□□ 1.21
HLA-C-208ENST00000487245 GPR31O00270 319 aa22.58■■□□□ 1.2
HLA-C-208ENST00000487245 PLATP00750 562 aa22.58■■□□□ 1.2
HLA-C-208ENST00000487245 RPL12P30050 165 aaKnown RBP22.58■■□□□ 1.2
HLA-C-208ENST00000487245 SULT1A2P50226 295 aa22.58■■□□□ 1.2
HLA-C-208ENST00000487245 RPL7L1Q6DKI1 246 aaKnown RBP22.58■■□□□ 1.2
HLA-C-208ENST00000487245 PRRX2Q99811 253 aa22.58■■□□□ 1.2
HLA-C-208ENST00000487245 MICU1Q9BPX6 476 aa22.58■■□□□ 1.2
HLA-C-208ENST00000487245 TTTY12Q9BZ98 90 aa22.58■■□□□ 1.2
HLA-C-208ENST00000487245 LIME1Q9H400 295 aa22.58■■□□□ 1.2
HLA-C-208ENST00000487245 NAA60Q9H7X0 242 aa22.58■■□□□ 1.2
HLA-C-208ENST00000487245 PLEKHA2Q9HB19 425 aa22.58■■□□□ 1.2
HLA-C-208ENST00000487245 OR2S2Q9NQN1 319 aa22.58■■□□□ 1.2
HLA-C-208ENST00000487245 NDRG3Q9UGV2 375 aa22.58■■□□□ 1.2
HLA-C-208ENST00000487245 TSPAN9O75954 239 aa22.57■■□□□ 1.2
HLA-C-208ENST00000487245 ZNF728P0DKX0 622 aa22.57■■□□□ 1.2
HLA-C-208ENST00000487245 BLOC1S1P78537 153 aa22.57■■□□□ 1.2
HLA-C-208ENST00000487245 ARF1P84077 181 aaKnown RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms