RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 CHST1O43916 411 aa19.89■□□□□ 0.77
LIME1-206ENST00000487026 ZNF737O75373 536 aa19.89■□□□□ 0.77
LIME1-206ENST00000487026 CHRM2P08172 466 aa19.89■□□□□ 0.77
LIME1-206ENST00000487026 KIR3DL2P43630 455 aa19.89■□□□□ 0.77
LIME1-206ENST00000487026 KIR2DS4P43632 304 aa19.89■□□□□ 0.77
LIME1-206ENST00000487026 EFNB2P52799 333 aa19.89■□□□□ 0.77
LIME1-206ENST00000487026 ZNF85Q03923 595 aa19.89■□□□□ 0.77
LIME1-206ENST00000487026 AANATQ16613 207 aa19.89■□□□□ 0.77
LIME1-206ENST00000487026 SLC25A26Q70HW3 274 aa19.89■□□□□ 0.77
LIME1-206ENST00000487026 C1QL4Q86Z23 238 aa19.89■□□□□ 0.77
LIME1-206ENST00000487026 OR4C13Q8NGP0 309 aa19.89■□□□□ 0.77
LIME1-206ENST00000487026 RNF166Q96A37 237 aaPredicted RBP19.89■□□□□ 0.77
LIME1-206ENST00000487026 OSBPL10Q9BXB5 764 aa19.89■□□□□ 0.77
LIME1-206ENST00000487026 CHST5Q9GZS9 411 aa19.89■□□□□ 0.77
LIME1-206ENST00000487026 PRKDCP78527 4128 aaKnown RBP19.88■□□□□ 0.77
LIME1-206ENST00000487026 LOC107986453A0A1B0GWG9 222 aa19.88■□□□□ 0.77
LIME1-206ENST00000487026 TMEM82A0PJX8 343 aa19.88■□□□□ 0.77
LIME1-206ENST00000487026 GATBO75879 557 aaKnown RBP19.88■□□□□ 0.77
LIME1-206ENST00000487026 ATP5HO75947 161 aa19.88■□□□□ 0.77
LIME1-206ENST00000487026 ZNF728P0DKX0 622 aa19.88■□□□□ 0.77
LIME1-206ENST00000487026 C2orf68Q2NKX9 166 aa19.88■□□□□ 0.77
LIME1-206ENST00000487026 GDPD3Q7L5L3 318 aa19.88■□□□□ 0.77
LIME1-206ENST00000487026 BORCS8Q96FH0 119 aa19.88■□□□□ 0.77
LIME1-206ENST00000487026 NKX3-1Q99801 234 aaPredicted RBP19.88■□□□□ 0.77
LIME1-206ENST00000487026 IL36RNQ9UBH0 155 aa19.88■□□□□ 0.77
LIME1-206ENST00000487026 FAM90A8PA6NJQ4 464 aa19.87■□□□□ 0.77
LIME1-206ENST00000487026 SERPINA3P01011 423 aa19.87■□□□□ 0.77
LIME1-206ENST00000487026 ARG1P05089 322 aa19.87■□□□□ 0.77
LIME1-206ENST00000487026 CSF1P09603 554 aa19.87■□□□□ 0.77
LIME1-206ENST00000487026 CALCBP10092 127 aa19.87■□□□□ 0.77
LIME1-206ENST00000487026 HERPUD1Q15011 391 aa19.87■□□□□ 0.77
LIME1-206ENST00000487026 Q6ZTK2 550 aa19.87■□□□□ 0.77
LIME1-206ENST00000487026 TET2Q6N021 2002 aaPredicted RBP19.86■□□□□ 0.77
LIME1-206ENST00000487026 DUSP1P28562 367 aa19.86■□□□□ 0.77
LIME1-206ENST00000487026 NPBWR2P48146 333 aa19.86■□□□□ 0.77
LIME1-206ENST00000487026 CDC42P60953 191 aa19.86■□□□□ 0.77
LIME1-206ENST00000487026 ISL1P61371 349 aa19.86■□□□□ 0.77
LIME1-206ENST00000487026 TMED1Q13445 227 aa19.86■□□□□ 0.77
LIME1-206ENST00000487026 EDDM3AQ14507 147 aa19.86■□□□□ 0.77
LIME1-206ENST00000487026 FAM189A2Q15884 450 aa19.86■□□□□ 0.77
LIME1-206ENST00000487026 LDLRAD2Q5SZI1 272 aa19.86■□□□□ 0.77
LIME1-206ENST00000487026 FAM220AQ7Z4H9 259 aa19.86■□□□□ 0.77
LIME1-206ENST00000487026 KLHDC1Q8N7A1 406 aa19.86■□□□□ 0.77
LIME1-206ENST00000487026 TPRX1Q8N7U7 411 aa19.86■□□□□ 0.77
LIME1-206ENST00000487026 OR13D1Q8NGV5 346 aa19.86■□□□□ 0.77
LIME1-206ENST00000487026 OR2T6Q8NHC8 308 aa19.86■□□□□ 0.77
LIME1-206ENST00000487026 EMG1Q92979 244 aaKnown RBP19.86■□□□□ 0.77
LIME1-206ENST00000487026 RFKQ969G6 155 aa19.86■□□□□ 0.77
LIME1-206ENST00000487026 ADAT3Q96EY9 351 aaPredicted RBP19.86■□□□□ 0.77
LIME1-206ENST00000487026 RAB18Q9NP72 206 aa19.86■□□□□ 0.77
LIME1-206ENST00000487026 ENTPD6O75354 484 aa19.85■□□□□ 0.77
LIME1-206ENST00000487026 IGHA1P01876 353 aa19.85■□□□□ 0.77
LIME1-206ENST00000487026 SSX2Q16385 188 aa19.85■□□□□ 0.77
LIME1-206ENST00000487026 TCF23Q7RTU1 214 aa19.85■□□□□ 0.77
LIME1-206ENST00000487026 OR8H2Q8N162 312 aa19.85■□□□□ 0.77
LIME1-206ENST00000487026 CCDC54Q8NEL0 328 aa19.85■□□□□ 0.77
LIME1-206ENST00000487026 OR52N4Q8NGI2 321 aa19.85■□□□□ 0.77
LIME1-206ENST00000487026 PYDC1Q8WXC3 89 aa19.85■□□□□ 0.77
LIME1-206ENST00000487026 SNX22Q96L94 193 aa19.85■□□□□ 0.77
LIME1-206ENST00000487026 CHST6Q9GZX3 395 aa19.85■□□□□ 0.77
LIME1-206ENST00000487026 RBFOX1Q9NWB1 397 aaKnown RBP19.85■□□□□ 0.77
LIME1-206ENST00000487026 IGKV1-9A0A0C4DH69 117 aa19.84■□□□□ 0.77
LIME1-206ENST00000487026 ODF3BA8MYP8 253 aa19.84■□□□□ 0.77
LIME1-206ENST00000487026 CIB2O75838 187 aa19.84■□□□□ 0.77
LIME1-206ENST00000487026 HAND1O96004 215 aa19.84■□□□□ 0.77
LIME1-206ENST00000487026 UBCP0CG48 685 aaKnown RBP19.84■□□□□ 0.77
LIME1-206ENST00000487026 IGHV1-8P0DP01 117 aa19.84■□□□□ 0.77
LIME1-206ENST00000487026 VSIG10L2P0DP72 767 aa19.84■□□□□ 0.77
LIME1-206ENST00000487026 BCL3P20749 454 aa19.84■□□□□ 0.77
LIME1-206ENST00000487026 POU3F4P49335 361 aa19.84■□□□□ 0.77
LIME1-206ENST00000487026 ATP1B3P54709 279 aa19.84■□□□□ 0.77
LIME1-206ENST00000487026 SNU13P55769 128 aaKnown RBP19.84■□□□□ 0.77
LIME1-206ENST00000487026 DYNC1I2Q13409 638 aaKnown RBP19.84■□□□□ 0.77
LIME1-206ENST00000487026 CNN3Q15417 329 aaKnown RBP19.84■□□□□ 0.77
LIME1-206ENST00000487026 CCBE1Q6UXH8 406 aaPredicted RBP19.84■□□□□ 0.77
LIME1-206ENST00000487026 OR2G2Q8NGZ5 317 aa19.84■□□□□ 0.77
LIME1-206ENST00000487026 FGGYQ96C11 551 aa19.84■□□□□ 0.77
LIME1-206ENST00000487026 NPFFR1Q9GZQ6 430 aa19.84■□□□□ 0.77
LIME1-206ENST00000487026 RANBP3Q9H6Z4 567 aaPredicted RBP19.84■□□□□ 0.77
LIME1-206ENST00000487026 IMPAD1Q9NX62 359 aa19.84■□□□□ 0.77
LIME1-206ENST00000487026 FRRS1LQ9P0K9 344 aa19.84■□□□□ 0.77
LIME1-206ENST00000487026 VGLL3A8MV65 326 aa19.83■□□□□ 0.77
LIME1-206ENST00000487026 JUNBP17275 347 aaPredicted RBP19.83■□□□□ 0.77
LIME1-206ENST00000487026 GABRR1P24046 479 aa19.83■□□□□ 0.77
LIME1-206ENST00000487026 RBP2P50120 134 aa19.83■□□□□ 0.77
LIME1-206ENST00000487026 MTCP1P56278 107 aa19.83■□□□□ 0.77
LIME1-206ENST00000487026 OR12D2P58182 307 aa19.83■□□□□ 0.77
LIME1-206ENST00000487026 NANOS3P60323 173 aaKnown RBP19.83■□□□□ 0.77
LIME1-206ENST00000487026 HABP2Q14520 560 aaPredicted RBP19.83■□□□□ 0.77
LIME1-206ENST00000487026 ZIK1Q3SY52 487 aaPredicted RBP19.83■□□□□ 0.77
LIME1-206ENST00000487026 TMEM219Q86XT9 240 aa19.83■□□□□ 0.77
LIME1-206ENST00000487026 PP6455Q8WZ26 134 aa19.83■□□□□ 0.77
LIME1-206ENST00000487026 RNFT2Q96EX2 444 aa19.83■□□□□ 0.77
LIME1-206ENST00000487026 ZNF714Q96N38 554 aa19.83■□□□□ 0.77
LIME1-206ENST00000487026 TBL2Q9Y4P3 447 aaKnown RBP19.83■□□□□ 0.77
LIME1-206ENST00000487026 ATF1P18846 271 aa19.82■□□□□ 0.76
LIME1-206ENST00000487026 GRK1Q15835 563 aa19.82■□□□□ 0.76
LIME1-206ENST00000487026 TMEM244Q5VVB8 128 aa19.82■□□□□ 0.76
LIME1-206ENST00000487026 ZNF626Q68DY1 528 aa19.82■□□□□ 0.76
LIME1-206ENST00000487026 LIAT1Q6ZQX7 453 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms