RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 DUSP1P28562 367 aa14.46□□□□□ -0.09
COL6A1-204ENST00000486023 EDDM3BP56851 147 aa14.46□□□□□ -0.09
COL6A1-204ENST00000486023 SMN1Q16637 294 aaKnown RBP14.46□□□□□ -0.09
COL6A1-204ENST00000486023 ZSCAN26Q16670 478 aa14.46□□□□□ -0.09
COL6A1-204ENST00000486023 MKXQ8IYA7 352 aa14.46□□□□□ -0.09
COL6A1-204ENST00000486023 APH1BQ8WW43 257 aa14.46□□□□□ -0.09
COL6A1-204ENST00000486023 DMRTB1Q96MA1 342 aa14.46□□□□□ -0.09
COL6A1-204ENST00000486023 MYCBPQ99417 103 aaPredicted RBP14.46□□□□□ -0.09
COL6A1-204ENST00000486023 HES4Q9HCC6 221 aa14.46□□□□□ -0.09
COL6A1-204ENST00000486023 ERVK13-1Q9NX77 482 aa14.46□□□□□ -0.09
COL6A1-204ENST00000486023 A0A1W2PPH5 198 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 OR4C45A6NMZ5 311 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 ANKRD65E5RJM6 399 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 E9PI62 339 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 ISG15P05161 165 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 CHRM2P08172 466 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 FBP1P09467 338 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 BCL3P20749 454 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 PRKACBP22694 351 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 COX7A1P24310 79 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 SAA4P35542 130 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 IER3P46695 156 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 NPBWR2P48146 333 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 CCR9P51686 369 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 ERVK11-1P61568 191 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 RAB40BQ12829 278 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 EDDM3AQ14507 147 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 KLHL22Q53GT1 634 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 NCR3LG1Q68D85 454 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 FDX2Q6P4F2 183 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 C1orf122Q6ZSJ8 110 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 OR5D18Q8NGL1 313 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 OR5D13Q8NGL4 314 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 OR13C9Q8NGT0 318 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 TNFRSF14Q92956 283 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 C10orf35Q96D05 121 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 ZNF747Q9BV97 191 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 DPAGT1Q9H3H5 408 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 NEK6Q9HC98 313 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 RBFOX1Q9NWB1 397 aaKnown RBP14.45□□□□□ -0.1
COL6A1-204ENST00000486023 IL36RNQ9UBH0 155 aa14.45□□□□□ -0.1
COL6A1-204ENST00000486023 SF3B6Q9Y3B4 125 aaKnown RBP14.45□□□□□ -0.1
COL6A1-204ENST00000486023 BTBD17A6NE02 478 aa14.44□□□□□ -0.1
COL6A1-204ENST00000486023 PRKACAP17612 351 aa14.44□□□□□ -0.1
COL6A1-204ENST00000486023 GABRR1P24046 479 aa14.44□□□□□ -0.1
COL6A1-204ENST00000486023 PAX6P26367 422 aa14.44□□□□□ -0.1
COL6A1-204ENST00000486023 UBE2E1P51965 193 aa14.44□□□□□ -0.1
COL6A1-204ENST00000486023 GBX2P52951 348 aaPredicted RBP14.44□□□□□ -0.1
COL6A1-204ENST00000486023 RAG2P55895 527 aa14.44□□□□□ -0.1
COL6A1-204ENST00000486023 METAP1DQ6UB28 335 aaPredicted RBP14.44□□□□□ -0.1
COL6A1-204ENST00000486023 ZNF782Q6ZMW2 699 aaPredicted RBP14.44□□□□□ -0.1
COL6A1-204ENST00000486023 GDPD3Q7L5L3 318 aa14.44□□□□□ -0.1
COL6A1-204ENST00000486023 TMEM86BQ8N661 226 aa14.44□□□□□ -0.1
COL6A1-204ENST00000486023 OR5AK2Q8NH90 309 aa14.44□□□□□ -0.1
COL6A1-204ENST00000486023 CNIH3Q8TBE1 160 aa14.44□□□□□ -0.1
COL6A1-204ENST00000486023 TSEN15Q8WW01 171 aaKnown RBP14.44□□□□□ -0.1
COL6A1-204ENST00000486023 OPALINQ96PE5 141 aa14.44□□□□□ -0.1
COL6A1-204ENST00000486023 PDCD1LG2Q9BQ51 273 aa14.44□□□□□ -0.1
COL6A1-204ENST00000486023 CHST6Q9GZX3 395 aa14.44□□□□□ -0.1
COL6A1-204ENST00000486023 C1RLQ9NZP8 487 aa14.44□□□□□ -0.1
COL6A1-204ENST00000486023 POMT1Q9Y6A1 747 aa14.44□□□□□ -0.1
COL6A1-204ENST00000486023 TRBV2A0A0J9YWF9 115 aa14.43□□□□□ -0.1
COL6A1-204ENST00000486023 K7N7A8 449 aa14.43□□□□□ -0.1
COL6A1-204ENST00000486023 GPR137BO60478 399 aa14.43□□□□□ -0.1
COL6A1-204ENST00000486023 HAND1O96004 215 aa14.43□□□□□ -0.1
COL6A1-204ENST00000486023 IGHA1P01876 353 aa14.43□□□□□ -0.1
COL6A1-204ENST00000486023 HCKP08631 526 aa14.43□□□□□ -0.1
COL6A1-204ENST00000486023 GTF2A1P52655 376 aaPredicted RBP14.43□□□□□ -0.1
COL6A1-204ENST00000486023 ZNF273Q14593 569 aa14.43□□□□□ -0.1
COL6A1-204ENST00000486023 RCN1Q15293 331 aa14.43□□□□□ -0.1
COL6A1-204ENST00000486023 SHISA2Q6UWI4 295 aa14.43□□□□□ -0.1
COL6A1-204ENST00000486023 LHFPL2Q6ZUX7 228 aa14.43□□□□□ -0.1
COL6A1-204ENST00000486023 RNF144BQ7Z419 303 aa14.43□□□□□ -0.1
COL6A1-204ENST00000486023 FAM58AQ8N1B3 248 aa14.43□□□□□ -0.1
COL6A1-204ENST00000486023 SYS1Q8N2H4 156 aa14.43□□□□□ -0.1
COL6A1-204ENST00000486023 DNAAF1Q8NEP3 725 aa14.43□□□□□ -0.1
COL6A1-204ENST00000486023 C17orf50Q8WW18 174 aa14.43□□□□□ -0.1
COL6A1-204ENST00000486023 COMMD4Q9H0A8 199 aa14.43□□□□□ -0.1
COL6A1-204ENST00000486023 BEX1Q9HBH7 125 aa14.43□□□□□ -0.1
COL6A1-204ENST00000486023 INPP5EQ9NRR6 644 aa14.43□□□□□ -0.1
COL6A1-204ENST00000486023 hCG_1809904A0A1W2PP81 198 aa14.42□□□□□ -0.1
COL6A1-204ENST00000486023 A0A1W2PPE2 198 aa14.42□□□□□ -0.1
COL6A1-204ENST00000486023 A0A1W2PR64 198 aa14.42□□□□□ -0.1
COL6A1-204ENST00000486023 A0A1W2PRV1 198 aa14.42□□□□□ -0.1
COL6A1-204ENST00000486023 WBP4O75554 376 aaKnown RBP14.42□□□□□ -0.1
COL6A1-204ENST00000486023 ZFPL1O95159 310 aa14.42□□□□□ -0.1
COL6A1-204ENST00000486023 SOX2P48431 317 aa14.42□□□□□ -0.1
COL6A1-204ENST00000486023 RELBQ01201 579 aa14.42□□□□□ -0.1
COL6A1-204ENST00000486023 SCN1BQ07699 218 aa14.42□□□□□ -0.1
COL6A1-204ENST00000486023 PDZK1IP1Q13113 114 aa14.42□□□□□ -0.1
COL6A1-204ENST00000486023 UTS2BQ765I0 119 aa14.42□□□□□ -0.1
COL6A1-204ENST00000486023 LDLRAD3Q86YD5 345 aa14.42□□□□□ -0.1
COL6A1-204ENST00000486023 TPRX1Q8N7U7 411 aa14.42□□□□□ -0.1
COL6A1-204ENST00000486023 OR4F5Q8NH21 305 aa14.42□□□□□ -0.1
COL6A1-204ENST00000486023 DYRK2Q92630 601 aa14.42□□□□□ -0.1
COL6A1-204ENST00000486023 SPSB1Q96BD6 273 aa14.42□□□□□ -0.1
COL6A1-204ENST00000486023 ZCCHC4Q9H5U6 513 aa14.42□□□□□ -0.1
COL6A1-204ENST00000486023 HEXA-AS1Q9H8Q6 139 aa14.42□□□□□ -0.1
COL6A1-204ENST00000486023 DHDHQ9UQ10 334 aa14.42□□□□□ -0.1
COL6A1-204ENST00000486023 GSTK1Q9Y2Q3 226 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms