RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 ACP7Q6ZNF0 438 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 WDR86Q86TI4 376 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 CALHM1Q8IU99 346 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 FAM58AQ8N1B3 248 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 ZNF561Q8N587 486 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 CHST4Q8NCG5 386 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 OR4M2Q8NGB6 313 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 OR51A2Q8NGJ7 313 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 RGP1Q92546 391 aaPredicted RBP6.92□□□□□ -1.3
SF3A1-208ENST00000485618 EMG1Q92979 244 aaKnown RBP6.92□□□□□ -1.3
SF3A1-208ENST00000485618 SLAMF9Q96A28 289 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 MRPS24Q96EL2 167 aaKnown RBP6.92□□□□□ -1.3
SF3A1-208ENST00000485618 C1orf159Q96HA4 380 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 MRI1Q9BV20 369 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 SSBP3Q9BWW4 388 aaPredicted RBP6.92□□□□□ -1.3
SF3A1-208ENST00000485618 CST11Q9H112 138 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 METTL17Q9H7H0 456 aaPredicted RBP6.92□□□□□ -1.3
SF3A1-208ENST00000485618 PPP1R3EQ9H7J1 279 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 SEBOXQ9HB31 216 aaPredicted RBP6.92□□□□□ -1.3
SF3A1-208ENST00000485618 STUB1Q9UNE7 303 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 ING4Q9UNL4 249 aa6.92□□□□□ -1.3
SF3A1-208ENST00000485618 NBEAL1Q6ZS30 2694 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 LOC105371242A0A075B767 164 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 TRAV1-2A0A0B4J238 106 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 hCG_1809904A0A1W2PP81 198 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 A0A1W2PPE2 198 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 A0A1W2PR64 198 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 A0A1W2PRV1 198 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 RFPL4AA6NLU0 287 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 A8MV72 311 aaPredicted RBP6.91□□□□□ -1.3
SF3A1-208ENST00000485618 RFPL4AL1F8VTS6 287 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 CRLF1O75462 422 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 RHBDL1O75783 438 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 INMTO95050 263 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 MAS1P04201 325 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 IGHV4-31P0DP07 118 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 GTF2F2P13984 249 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 CD36P16671 472 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 IGFBP3P17936 291 aaPredicted RBP6.91□□□□□ -1.3
SF3A1-208ENST00000485618 CALRP27797 417 aaKnown RBP6.91□□□□□ -1.3
SF3A1-208ENST00000485618 RPS25P62851 125 aaKnown RBP6.91□□□□□ -1.3
SF3A1-208ENST00000485618 BLMHQ13867 455 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 DMRTC1Q5HYR2 192 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 FAM201AQ5SY85 155 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 DCAF12L2Q5VW00 463 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 ELP2Q6IA86 826 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 LINC00596Q86U02 117 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 TPRA1Q86W33 373 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 CMTM4Q8IZR5 234 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 MAPK1IP1LQ8NDC0 245 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 OR52N4Q8NGI2 321 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 OR13C5Q8NGS8 318 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 RFT1Q96AA3 541 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 TMEM186Q96B77 213 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 SDSLQ96GA7 329 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 KCTD7Q96MP8 289 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 MRPS26Q9BYN8 205 aaKnown RBP6.91□□□□□ -1.3
SF3A1-208ENST00000485618 FAM234AQ9H0X4 552 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 SPACA1Q9HBV2 294 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 EXOSC4Q9NPD3 245 aaKnown RBP6.91□□□□□ -1.3
SF3A1-208ENST00000485618 YAE1D1Q9NRH1 226 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 IL36GQ9NZH8 169 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 MTCH1Q9NZJ7 389 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 LPAR3Q9UBY5 353 aa6.91□□□□□ -1.3
SF3A1-208ENST00000485618 TANC2Q9HCD6 1990 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 IGKV1-27A0A075B6S5 117 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 IGHV3OR15-7A0A075B7D8 119 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 A0A096LNT2 108 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 TRBV23-1A0A0A0MS06 115 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 RNF212BA8MTL3 300 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 F5H0A9 414 aaPredicted RBP6.9□□□□□ -1.3
SF3A1-208ENST00000485618 GABRPO00591 440 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 WNT9BO14905 357 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 DEGS1O15121 323 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 SIGLEC5O15389 551 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 ENSAO43768 121 aaKnown RBP6.9□□□□□ -1.3
SF3A1-208ENST00000485618 TMEM127O75204 238 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 SC5DO75845 299 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 BPNT1O95861 308 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 PSG2P11465 335 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 JUNBP17275 347 aaPredicted RBP6.9□□□□□ -1.3
SF3A1-208ENST00000485618 NDUFB7P17568 137 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 PRKACAP17612 351 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 FGF9P31371 208 aaPredicted RBP6.9□□□□□ -1.3
SF3A1-208ENST00000485618 CAV3P56539 151 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 FGF12P61328 243 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 ERVK11-1P61568 191 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 LCN2P80188 198 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 FABP5Q01469 135 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 IKZF1Q13422 519 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 ZNF146Q15072 292 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 WDR25Q64LD2 544 aaPredicted RBP6.9□□□□□ -1.3
SF3A1-208ENST00000485618 STUMQ69YW2 141 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 AWAT2Q6E213 333 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 CD200R1LQ6Q8B3 271 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 ASCL4Q6XD76 172 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 ZNF788Q6ZQV5 615 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 OR5T2Q8NGG2 359 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 OR5D18Q8NGL1 313 aa6.9□□□□□ -1.3
SF3A1-208ENST00000485618 OR6M1Q8NGM8 313 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms