RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 NKX3-1Q99801 234 aaPredicted RBP4.77□□□□□ -1.65
CSDE1-207ENST00000483407 TSSK6Q9BXA6 273 aa4.77□□□□□ -1.65
CSDE1-207ENST00000483407 KRTAP3-1Q9BYR8 98 aa4.77□□□□□ -1.65
CSDE1-207ENST00000483407 WDR13Q9H1Z4 485 aa4.77□□□□□ -1.65
CSDE1-207ENST00000483407 HEXA-AS1Q9H8Q6 139 aa4.77□□□□□ -1.65
CSDE1-207ENST00000483407 IL1RAPQ9NPH3 570 aa4.77□□□□□ -1.65
CSDE1-207ENST00000483407 NECAP2Q9NVZ3 263 aa4.77□□□□□ -1.65
CSDE1-207ENST00000483407 IL20Q9NYY1 176 aa4.77□□□□□ -1.65
CSDE1-207ENST00000483407 DNAJC27Q9NZQ0 273 aa4.77□□□□□ -1.65
CSDE1-207ENST00000483407 NLKQ9UBE8 527 aa4.77□□□□□ -1.65
CSDE1-207ENST00000483407 FOXJ3Q9UPW0 622 aa4.77□□□□□ -1.65
CSDE1-207ENST00000483407 SIGLEC9Q9Y336 463 aa4.77□□□□□ -1.65
CSDE1-207ENST00000483407 DOCK11Q5JSL3 2073 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 OR2AT4A6NND4 320 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 RIIAD1A6NNX1 92 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 ZNF850A8MQ14 1090 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 TNFRSF11BO00300 401 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 CCNB2O95067 398 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 CST4P01036 141 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 SEMG1P04279 462 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 CHRM2P08172 466 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 ACAA1P09110 424 aaPredicted RBP4.76□□□□□ -1.65
CSDE1-207ENST00000483407 H2BFMP0C1H6 154 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 PSKH1P11801 424 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 HSD17B1P14061 328 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 SPI1P17947 270 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 PRDX6P30041 224 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 CAPZA1P52907 286 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 FAM3BP58499 235 aaPredicted RBP4.76□□□□□ -1.65
CSDE1-207ENST00000483407 BLOC1S1P78537 153 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 PRDX4Q13162 271 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 NSUN5P1Q3KNT7 163 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 KLHL12Q53G59 568 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 FAM76BQ5HYJ3 339 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 C16orf89Q6UX73 402 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 Q6ZWC4 215 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 PRSS45Q7RTY3 260 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 NDUFA11Q86Y39 141 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 ERI1Q8IV48 349 aaKnown RBP4.76□□□□□ -1.65
CSDE1-207ENST00000483407 ZDHHC23Q8IYP9 409 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 TMEM185AQ8NFB2 350 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 OR9Q2Q8NGE9 314 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 ANGPTL6Q8NI99 470 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 ZNF671Q8TAW3 534 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 FAM81AQ8TBF8 368 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 RNF133Q8WVZ7 376 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 ZNRF4Q8WWF5 429 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 OR5P3Q8WZ94 311 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 PIGCQ92535 297 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 RORBQ92753 470 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 AIFM2Q9BRQ8 373 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 BTBD10Q9BSF8 475 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 ABHD6Q9BV23 337 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 NMNAT2Q9BZQ4 307 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.76□□□□□ -1.65
CSDE1-207ENST00000483407 SERTAD4Q9NUC0 356 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 MGAT4CQ9UBM8 478 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 LYVE1Q9Y5Y7 322 aa4.76□□□□□ -1.65
CSDE1-207ENST00000483407 AP4M1O00189 453 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 ARPC2O15144 300 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 SOX14O95416 240 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 ALDOBP05062 364 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 LYNP07948 512 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 CLUP10909 449 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 PSG2P11465 335 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 H2AFXP16104 143 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-207ENST00000483407 OPRL1P41146 370 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 GPM6AP51674 278 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 HMGA2P52926 109 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 RPL31P62899 125 aaKnown RBP4.75□□□□□ -1.65
CSDE1-207ENST00000483407 GNG3P63215 75 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 HSP90B2PQ58FF3 399 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 LINC01590Q5TEZ4 76 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 HCP5Q6MZN7 132 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 MKXQ8IYA7 352 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 PGAM4Q8N0Y7 254 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 AQP11Q8NBQ7 271 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 ZNRF1Q8ND25 227 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 OR8D4Q8NGM9 314 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 OR4Q3Q8NH05 313 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 OR5K1Q8NHB7 308 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 C17orf50Q8WW18 174 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 GLMPQ8WWB7 406 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 ITFG2Q969R8 447 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 OTULINQ96BN8 352 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 SDSLQ96GA7 329 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 CDCA4Q9BXL8 241 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 PPP1R3EQ9H7J1 279 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 NIPAL2Q9H841 368 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 PLEKHA2Q9HB19 425 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 ELL3Q9HB65 397 aaPredicted RBP4.75□□□□□ -1.65
CSDE1-207ENST00000483407 ABCB10Q9NRK6 738 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 CMC2Q9NRP2 79 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 ARMC1Q9NVT9 282 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 ZNF319Q9P2F9 582 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 PITPNC1Q9UKF7 332 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 LRP12Q9Y561 859 aa4.75□□□□□ -1.65
CSDE1-207ENST00000483407 IGKV1D-17A0A075B6S4 117 aa4.74□□□□□ -1.65
CSDE1-207ENST00000483407 OR5B21A6NL26 309 aa4.74□□□□□ -1.65
CSDE1-207ENST00000483407 FAM183AA6NL82 134 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms