RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 ODF1Q14990 250 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 FDX2Q6P4F2 183 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 KLHL24Q6TFL4 600 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 NPAS4Q8IUM7 802 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 OR10G4Q8NGN3 311 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 GRHL3Q8TE85 626 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 C11orf40Q8WZ69 217 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 HSPB9Q9BQS6 159 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 RTBDNQ9BSG5 229 aaPredicted RBP6.87□□□□□ -1.31
COL4A5-205ENST00000483338 SLC46A2Q9BY10 475 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 PNO1Q9NRX1 252 aaKnown RBP6.87□□□□□ -1.31
COL4A5-205ENST00000483338 AK3Q9UIJ7 227 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 PSG11Q9UQ72 335 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 KLHDC2Q9Y2U9 406 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 RNF114Q9Y508 228 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 USP34Q70CQ2 3546 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 PROB1E7EW31 1015 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 H3BNC9 293 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 SEMA4FO95754 770 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 ZNF43P17038 809 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 PAX2Q02962 417 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 TCTN1Q2MV58 587 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 ASPHD2Q6ICH7 369 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 SLC16A9Q7RTY1 509 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 TMEM123Q8N131 208 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 OR1N2Q8NGR9 330 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 CMTM2Q8TAZ6 248 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 ZNF479Q96JC4 524 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 SLC46A1Q96NT5 459 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 ABHD6Q9BV23 337 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 PLK3Q9H4B4 646 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 ZNF160Q9HCG1 818 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 FBXO34Q9NWN3 711 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 GJE1A6NN92 205 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 OR7C2O60412 319 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 TBL1XO60907 577 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 HIST1H1CP16403 213 aaKnown RBP6.87□□□□□ -1.31
COL4A5-205ENST00000483338 TSPOP30536 169 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 GALR1P47211 349 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 SNRPD1P62314 119 aaKnown RBP6.87□□□□□ -1.31
COL4A5-205ENST00000483338 PLAURQ03405 335 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 ELOA3BQ3SY89 546 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 SLC8B1Q6J4K2 584 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 CSNK1A1LQ8N752 337 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 Q8N976 141 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 ELOA3Q8NG57 546 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 SCARF2Q96GP6 870 aaPredicted RBP6.87□□□□□ -1.31
COL4A5-205ENST00000483338 CRISPLD2Q9H0B8 497 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 LPAR5Q9H1C0 372 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 CALHM2Q9HA72 323 aa6.87□□□□□ -1.31
COL4A5-205ENST00000483338 MRM2Q9UI43 246 aaKnown RBP6.87□□□□□ -1.31
COL4A5-205ENST00000483338 IGHV1-69-2A0A0G2JMI3 117 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 LOC102723971A0A1B0GUV8 181 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 ZIC2O95409 532 aaPredicted RBP6.86□□□□□ -1.31
COL4A5-205ENST00000483338 SCGB1D2O95969 90 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 MPC1LP0DKB6 136 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 GLB1P16278 677 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 PSMB5P28074 263 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 KHKP50053 298 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 ASCL1P50553 236 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 LINC00310P59036 64 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 TMEM225Q6GV28 225 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 TMEM144Q7Z5S9 345 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 C1orf174Q8IYL3 243 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 CADM4Q8NFZ8 388 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 OR2G3Q8NGZ4 309 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 RHBDD1Q8TEB9 315 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 BADQ92934 168 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 ATP6V0BQ99437 205 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 MANBALQ9NQG1 85 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 HIF3AQ9Y2N7 669 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 IGLC7A0M8Q6 106 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 OR2AG2A6NM03 316 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 TIAF1O95411 115 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 CLDN7O95471 211 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 TGM3Q08188 693 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 SHBQ15464 509 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 GLYATL3Q5SZD4 288 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 MRGPRGQ86SM5 289 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 ZNF595Q8IYB9 648 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 UBALD2Q8IYN6 164 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 ZNF740Q8NDX6 193 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 OR4D6Q8NGJ1 314 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 OR6K6Q8NGW6 343 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 ASB10Q8WXI3 467 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 NKD1Q969G9 470 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 NUDT16L1Q9BRJ7 211 aaKnown RBP6.86□□□□□ -1.31
COL4A5-205ENST00000483338 NUDT9Q9BW91 350 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 TUBD1Q9UJT1 453 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 MRPS16Q9Y3D3 137 aaKnown RBP6.86□□□□□ -1.31
COL4A5-205ENST00000483338 RBFOX2O43251 390 aaKnown RBP eCLIP6.86□□□□□ -1.31
COL4A5-205ENST00000483338 CDS2O95674 445 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 HMGN2P05204 90 aaKnown RBP6.86□□□□□ -1.31
COL4A5-205ENST00000483338 AK4P27144 223 aaPredicted RBP6.86□□□□□ -1.31
COL4A5-205ENST00000483338 OR1D2P34982 312 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 GRK6P43250 576 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 RAB9AP51151 201 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 CLDN2P57739 230 aa6.86□□□□□ -1.31
COL4A5-205ENST00000483338 SUMO1P63165 101 aaKnown RBP6.86□□□□□ -1.31
COL4A5-205ENST00000483338 TMEM41BQ5BJD5 291 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms