RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 C6orf201Q7Z4U5 140 aa13.56□□□□□ -0.24
RXRA-202ENST00000481739 PEG10Q86TG7 708 aaKnown RBP13.56□□□□□ -0.24
RXRA-202ENST00000481739 MDP1Q86V88 176 aa13.56□□□□□ -0.24
RXRA-202ENST00000481739 LHFPL1Q86WI0 220 aa13.56□□□□□ -0.24
RXRA-202ENST00000481739 UXS1Q8NBZ7 420 aa13.56□□□□□ -0.24
RXRA-202ENST00000481739 MITD1Q8WV92 249 aa13.56□□□□□ -0.24
RXRA-202ENST00000481739 MRGPRFQ96AM1 343 aa13.56□□□□□ -0.24
RXRA-202ENST00000481739 DOCK7Q96N67 2140 aa13.56□□□□□ -0.24
RXRA-202ENST00000481739 ST6GALNAC5Q9BVH7 336 aa13.56□□□□□ -0.24
RXRA-202ENST00000481739 PPA2Q9H2U2 334 aa13.56□□□□□ -0.24
RXRA-202ENST00000481739 IGKV1-12A0A0C4DH73 117 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 OR5B21A6NL26 309 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 ANKRD30BLA7E2S9 258 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 PDCD6O75340 191 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 DUS4LO95620 317 aaKnown RBP13.55□□□□□ -0.24
RXRA-202ENST00000481739 IGKV1D-12P01611 117 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 TDGF1P3P51864 188 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 H2BFSP57053 126 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 SNRPD2P62316 118 aaKnown RBP13.55□□□□□ -0.24
RXRA-202ENST00000481739 IL13RA1P78552 427 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 TAF9Q16594 264 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 EIF2S3LQ2VIR3 472 aaKnown RBP13.55□□□□□ -0.24
RXRA-202ENST00000481739 TMEM128Q5BJH2 165 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 NKAPLQ5M9Q1 402 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 C1orf185Q5T7R7 199 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 SIGIRRQ6IA17 410 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 C3P1Q6ZMU1 363 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 RTN4RL2Q86UN3 420 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 MKXQ8IYA7 352 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 OR5M8Q8NGP6 311 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 ZNF701Q9NV72 531 aaPredicted RBP13.55□□□□□ -0.24
RXRA-202ENST00000481739 GPR160Q9UJ42 338 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 GPR132Q9UNW8 380 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 ST3GAL6Q9Y274 331 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 PLSCR5A0PG75 271 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 C9orf170A2RU37 121 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 PRRG2O14669 202 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 PLATP00750 562 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 CCL2P13500 99 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 ZNF14P17017 642 aaPredicted RBP13.55□□□□□ -0.24
RXRA-202ENST00000481739 COX5AP20674 150 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 IGHV1-2P23083 117 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 HOXC12P31275 282 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 PTGER4P35408 488 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 FBXL14Q8N1E6 418 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 CMSS1Q9BQ75 279 aaKnown RBP13.55□□□□□ -0.24
RXRA-202ENST00000481739 SLX1AQ9BQ83 275 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 CLEC4MQ9H2X3 399 aaPredicted RBP13.55□□□□□ -0.24
RXRA-202ENST00000481739 PLK3Q9H4B4 646 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 RHOFQ9HBH0 211 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 EHFQ9NZC4 300 aa13.55□□□□□ -0.24
RXRA-202ENST00000481739 RP1L1Q8IWN7 2480 aaPredicted RBP13.54□□□□□ -0.24
RXRA-202ENST00000481739 TOXO94900 526 aa13.54□□□□□ -0.24
RXRA-202ENST00000481739 NGFP01138 241 aa13.54□□□□□ -0.24
RXRA-202ENST00000481739 CRHP06850 196 aa13.54□□□□□ -0.24
RXRA-202ENST00000481739 ZNF35P13682 527 aa13.54□□□□□ -0.24
RXRA-202ENST00000481739 WNT5AP41221 380 aa13.54□□□□□ -0.24
RXRA-202ENST00000481739 ZNF81P51508 661 aa13.54□□□□□ -0.24
RXRA-202ENST00000481739 PRSS12P56730 875 aa13.54□□□□□ -0.24
RXRA-202ENST00000481739 PPP1R1AQ13522 171 aa13.54□□□□□ -0.24
RXRA-202ENST00000481739 ITPR1Q14643 2758 aa13.54□□□□□ -0.24
RXRA-202ENST00000481739 LGALSLQ3ZCW2 172 aaPredicted RBP13.54□□□□□ -0.24
RXRA-202ENST00000481739 MYO7BQ6PIF6 2116 aa13.54□□□□□ -0.24
RXRA-202ENST00000481739 UNQ6126/PRO20091Q6UXV3 157 aa13.54□□□□□ -0.24
RXRA-202ENST00000481739 FBXW12Q6X9E4 464 aa13.54□□□□□ -0.24
RXRA-202ENST00000481739 SLC25A26Q70HW3 274 aa13.54□□□□□ -0.24
RXRA-202ENST00000481739 LINC00596Q86U02 117 aa13.54□□□□□ -0.24
RXRA-202ENST00000481739 ZNF573Q86YE8 665 aa13.54□□□□□ -0.24
RXRA-202ENST00000481739 C17orf78Q8N4C9 275 aa13.54□□□□□ -0.24
RXRA-202ENST00000481739 HPSE2Q8WWQ2 592 aa13.54□□□□□ -0.24
RXRA-202ENST00000481739 DHRS9Q9BPW9 319 aa13.54□□□□□ -0.24
RXRA-202ENST00000481739 OBP2BQ9NPH6 170 aa13.54□□□□□ -0.24
RXRA-202ENST00000481739 OSGIN2Q9Y236 505 aa13.54□□□□□ -0.24
RXRA-202ENST00000481739 A0A0B4J2A0 478 aa13.53□□□□□ -0.24
RXRA-202ENST00000481739 MBD3L4A6NDZ8 208 aaPredicted RBP13.53□□□□□ -0.24
RXRA-202ENST00000481739 MBD3L3A6NE82 208 aaPredicted RBP13.53□□□□□ -0.24
RXRA-202ENST00000481739 MBD3L5A6NJ08 208 aaPredicted RBP13.53□□□□□ -0.24
RXRA-202ENST00000481739 GEMIN2O14893 280 aaKnown RBP13.53□□□□□ -0.24
RXRA-202ENST00000481739 CD8AP01732 235 aa13.53□□□□□ -0.24
RXRA-202ENST00000481739 SFTPBP07988 381 aa13.53□□□□□ -0.24
RXRA-202ENST00000481739 SFTPCP11686 197 aa13.53□□□□□ -0.24
RXRA-202ENST00000481739 PPP3CBP16298 524 aa13.53□□□□□ -0.24
RXRA-202ENST00000481739 FUT3P21217 361 aa13.53□□□□□ -0.24
RXRA-202ENST00000481739 TUBG1P23258 451 aa13.53□□□□□ -0.24
RXRA-202ENST00000481739 NFYAP23511 347 aaPredicted RBP13.53□□□□□ -0.24
RXRA-202ENST00000481739 KIR2DL2P43627 348 aaPredicted RBP13.53□□□□□ -0.24
RXRA-202ENST00000481739 ARPC4P59998 168 aa13.53□□□□□ -0.24
RXRA-202ENST00000481739 FOXF2Q12947 444 aa13.53□□□□□ -0.24
RXRA-202ENST00000481739 GABRA6Q16445 453 aa13.53□□□□□ -0.24
RXRA-202ENST00000481739 VWA1Q6PCB0 445 aa13.53□□□□□ -0.24
RXRA-202ENST00000481739 CALHM1Q8IU99 346 aa13.53□□□□□ -0.24
RXRA-202ENST00000481739 OR10AD1Q8NGE0 317 aa13.53□□□□□ -0.24
RXRA-202ENST00000481739 LILRB4Q8NHJ6 448 aa13.53□□□□□ -0.24
RXRA-202ENST00000481739 MBD3L2Q8NHZ7 208 aaPredicted RBP13.53□□□□□ -0.24
RXRA-202ENST00000481739 MARCH1Q8TCQ1 289 aa13.53□□□□□ -0.24
RXRA-202ENST00000481739 CDH20Q9HBT6 801 aa13.53□□□□□ -0.24
RXRA-202ENST00000481739 TUBG2Q9NRH3 451 aa13.53□□□□□ -0.24
RXRA-202ENST00000481739 SHPKQ9UHJ6 478 aa13.53□□□□□ -0.24
RXRA-202ENST00000481739 ANXA10Q9UJ72 324 aa13.53□□□□□ -0.24
RXRA-202ENST00000481739 FAM215AQ9Y5M1 114 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms