RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 C17orf98A8MV24 154 aa15.04■□□□□ -0
CLK1-211ENST00000481641 CHST1O43916 411 aa15.04■□□□□ -0
CLK1-211ENST00000481641 ZNF737O75373 536 aa15.04■□□□□ -0
CLK1-211ENST00000481641 ATP5HO75947 161 aa15.04■□□□□ -0
CLK1-211ENST00000481641 CALCBP10092 127 aa15.04■□□□□ -0
CLK1-211ENST00000481641 RAB13P51153 203 aa15.04■□□□□ -0
CLK1-211ENST00000481641 FUT6P51993 359 aa15.04■□□□□ -0
CLK1-211ENST00000481641 LGALS4P56470 323 aa15.04■□□□□ -0
CLK1-211ENST00000481641 EDDM3BP56851 147 aa15.04■□□□□ -0
CLK1-211ENST00000481641 C1QL4Q86Z23 238 aa15.04■□□□□ -0
CLK1-211ENST00000481641 EGFL6Q8IUX8 553 aa15.04■□□□□ -0
CLK1-211ENST00000481641 C11orf44Q8N8P7 122 aa15.04■□□□□ -0
CLK1-211ENST00000481641 PYDC1Q8WXC3 89 aa15.04■□□□□ -0
CLK1-211ENST00000481641 CHST5Q9GZS9 411 aa15.04■□□□□ -0
CLK1-211ENST00000481641 hCG_1809904A0A1W2PP81 198 aa15.03■□□□□ -0
CLK1-211ENST00000481641 A0A1W2PPE2 198 aa15.03■□□□□ -0
CLK1-211ENST00000481641 A0A1W2PR64 198 aa15.03■□□□□ -0
CLK1-211ENST00000481641 A0A1W2PRV1 198 aa15.03■□□□□ -0
CLK1-211ENST00000481641 GATBO75879 557 aaKnown RBP15.03■□□□□ -0
CLK1-211ENST00000481641 CHRM2P08172 466 aa15.03■□□□□ -0
CLK1-211ENST00000481641 EFNB2P52799 333 aa15.03■□□□□ -0
CLK1-211ENST00000481641 ISL1P61371 349 aa15.03■□□□□ -0
CLK1-211ENST00000481641 LDLRAD2Q5SZI1 272 aa15.03■□□□□ -0
CLK1-211ENST00000481641 TCF23Q7RTU1 214 aa15.03■□□□□ -0
CLK1-211ENST00000481641 TPRX1Q8N7U7 411 aa15.03■□□□□ -0
CLK1-211ENST00000481641 ADAT3Q96EY9 351 aaPredicted RBP15.03■□□□□ -0
CLK1-211ENST00000481641 BORCS8Q96FH0 119 aa15.03■□□□□ -0
CLK1-211ENST00000481641 PRKDCP78527 4128 aaKnown RBP15.03■□□□□ -0
CLK1-211ENST00000481641 IGKV1-9A0A0C4DH69 117 aa15.02■□□□□ -0
CLK1-211ENST00000481641 FAM90A8PA6NJQ4 464 aa15.02■□□□□ -0
CLK1-211ENST00000481641 ENTPD6O75354 484 aa15.02■□□□□ -0
CLK1-211ENST00000481641 CIB2O75838 187 aa15.02■□□□□ -0
CLK1-211ENST00000481641 IGHA1P01876 353 aa15.02■□□□□ -0
CLK1-211ENST00000481641 ARG1P05089 322 aa15.02■□□□□ -0
CLK1-211ENST00000481641 ZNF728P0DKX0 622 aa15.02■□□□□ -0
CLK1-211ENST00000481641 DUSP1P28562 367 aa15.02■□□□□ -0
CLK1-211ENST00000481641 KIR2DS4P43632 304 aa15.02■□□□□ -0
CLK1-211ENST00000481641 NPBWR2P48146 333 aa15.02■□□□□ -0
CLK1-211ENST00000481641 CDC42P60953 191 aa15.02■□□□□ -0
CLK1-211ENST00000481641 TMED1Q13445 227 aa15.02■□□□□ -0
CLK1-211ENST00000481641 EDDM3AQ14507 147 aa15.02■□□□□ -0
CLK1-211ENST00000481641 AANATQ16613 207 aa15.02■□□□□ -0
CLK1-211ENST00000481641 GDPD3Q7L5L3 318 aa15.02■□□□□ -0
CLK1-211ENST00000481641 FAM220AQ7Z4H9 259 aa15.02■□□□□ -0
CLK1-211ENST00000481641 OR52N4Q8NGI2 321 aa15.02■□□□□ -0
CLK1-211ENST00000481641 OR4C13Q8NGP0 309 aa15.02■□□□□ -0
CLK1-211ENST00000481641 OR2G2Q8NGZ5 317 aa15.02■□□□□ -0
CLK1-211ENST00000481641 EMG1Q92979 244 aaKnown RBP15.02■□□□□ -0
CLK1-211ENST00000481641 RFKQ969G6 155 aa15.02■□□□□ -0
CLK1-211ENST00000481641 NKX3-1Q99801 234 aaPredicted RBP15.02■□□□□ -0
CLK1-211ENST00000481641 CHST6Q9GZX3 395 aa15.02■□□□□ -0
CLK1-211ENST00000481641 RBFOX1Q9NWB1 397 aaKnown RBP15.02■□□□□ -0
CLK1-211ENST00000481641 AASSQ9UDR5 926 aa15.02■□□□□ -0
CLK1-211ENST00000481641 SERPINA3P01011 423 aa15.01□□□□□ -0.01
CLK1-211ENST00000481641 JUNBP17275 347 aaPredicted RBP15.01□□□□□ -0.01
CLK1-211ENST00000481641 BCL3P20749 454 aa15.01□□□□□ -0.01
CLK1-211ENST00000481641 POU3F4P49335 361 aa15.01□□□□□ -0.01
CLK1-211ENST00000481641 SNU13P55769 128 aaKnown RBP15.01□□□□□ -0.01
CLK1-211ENST00000481641 NANOS3P60323 173 aaKnown RBP15.01□□□□□ -0.01
CLK1-211ENST00000481641 HERPUD1Q15011 391 aa15.01□□□□□ -0.01
CLK1-211ENST00000481641 FAM189A2Q15884 450 aa15.01□□□□□ -0.01
CLK1-211ENST00000481641 C2orf68Q2NKX9 166 aa15.01□□□□□ -0.01
CLK1-211ENST00000481641 ZIK1Q3SY52 487 aaPredicted RBP15.01□□□□□ -0.01
CLK1-211ENST00000481641 CCBE1Q6UXH8 406 aaPredicted RBP15.01□□□□□ -0.01
CLK1-211ENST00000481641 RNF144BQ7Z419 303 aa15.01□□□□□ -0.01
CLK1-211ENST00000481641 OR8H2Q8N162 312 aa15.01□□□□□ -0.01
CLK1-211ENST00000481641 CCDC54Q8NEL0 328 aa15.01□□□□□ -0.01
CLK1-211ENST00000481641 FGGYQ96C11 551 aa15.01□□□□□ -0.01
CLK1-211ENST00000481641 RNFT2Q96EX2 444 aa15.01□□□□□ -0.01
CLK1-211ENST00000481641 SNX22Q96L94 193 aa15.01□□□□□ -0.01
CLK1-211ENST00000481641 IMPAD1Q9NX62 359 aa15.01□□□□□ -0.01
CLK1-211ENST00000481641 FRRS1LQ9P0K9 344 aa15.01□□□□□ -0.01
CLK1-211ENST00000481641 ODF3BA8MYP8 253 aa15□□□□□ -0.01
CLK1-211ENST00000481641 HAND1O96004 215 aa15□□□□□ -0.01
CLK1-211ENST00000481641 CSF1P09603 554 aa15□□□□□ -0.01
CLK1-211ENST00000481641 UBCP0CG48 685 aaKnown RBP15□□□□□ -0.01
CLK1-211ENST00000481641 IGHV1-8P0DP01 117 aa15□□□□□ -0.01
CLK1-211ENST00000481641 ATP1B3P54709 279 aa15□□□□□ -0.01
CLK1-211ENST00000481641 OR12D2P58182 307 aa15□□□□□ -0.01
CLK1-211ENST00000481641 HABP2Q14520 560 aaPredicted RBP15□□□□□ -0.01
CLK1-211ENST00000481641 CNN3Q15417 329 aaKnown RBP15□□□□□ -0.01
CLK1-211ENST00000481641 SSX2Q16385 188 aa15□□□□□ -0.01
CLK1-211ENST00000481641 Q6ZTK2 550 aa15□□□□□ -0.01
CLK1-211ENST00000481641 KLHDC1Q8N7A1 406 aa15□□□□□ -0.01
CLK1-211ENST00000481641 OR13D1Q8NGV5 346 aa15□□□□□ -0.01
CLK1-211ENST00000481641 OR10AC1Q8NH08 325 aa15□□□□□ -0.01
CLK1-211ENST00000481641 RFT1Q96AA3 541 aa15□□□□□ -0.01
CLK1-211ENST00000481641 J3QRE1 110 aa14.99□□□□□ -0.01
CLK1-211ENST00000481641 EI24O14681 340 aa14.99□□□□□ -0.01
CLK1-211ENST00000481641 PSPNO60542 156 aa14.99□□□□□ -0.01
CLK1-211ENST00000481641 ALPLP05186 524 aa14.99□□□□□ -0.01
CLK1-211ENST00000481641 VSIG10L2P0DP72 767 aa14.99□□□□□ -0.01
CLK1-211ENST00000481641 ATF1P18846 271 aa14.99□□□□□ -0.01
CLK1-211ENST00000481641 GABRR1P24046 479 aa14.99□□□□□ -0.01
CLK1-211ENST00000481641 AZGP1P25311 298 aaKnown RBP14.99□□□□□ -0.01
CLK1-211ENST00000481641 RBP2P50120 134 aa14.99□□□□□ -0.01
CLK1-211ENST00000481641 MTCP1P56278 107 aa14.99□□□□□ -0.01
CLK1-211ENST00000481641 ZNF91Q05481 1191 aa14.99□□□□□ -0.01
CLK1-211ENST00000481641 DYNC1I2Q13409 638 aaKnown RBP14.99□□□□□ -0.01
CLK1-211ENST00000481641 GRK1Q15835 563 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms