RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 LALBAP00709 142 aa12.88□□□□□ -0.35
HDLBP-238ENST00000479894 IRF2P14316 349 aa12.88□□□□□ -0.35
HDLBP-238ENST00000479894 MDH2P40926 338 aaKnown RBP12.88□□□□□ -0.35
HDLBP-238ENST00000479894 GATA4P43694 442 aa12.88□□□□□ -0.35
HDLBP-238ENST00000479894 ZMYND11Q15326 602 aa12.88□□□□□ -0.35
HDLBP-238ENST00000479894 TIMM50Q3ZCQ8 353 aa12.88□□□□□ -0.35
HDLBP-238ENST00000479894 SYT6Q5T7P8 510 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-238ENST00000479894 LIPKQ5VXJ0 399 aa12.88□□□□□ -0.35
HDLBP-238ENST00000479894 XAF1Q6GPH4 301 aa12.88□□□□□ -0.35
HDLBP-238ENST00000479894 Q6ZR03 302 aa12.88□□□□□ -0.35
HDLBP-238ENST00000479894 MOB3CQ70IA8 216 aa12.88□□□□□ -0.35
HDLBP-238ENST00000479894 ZNF573Q86YE8 665 aa12.88□□□□□ -0.35
HDLBP-238ENST00000479894 C1orf87Q8N0U7 546 aa12.88□□□□□ -0.35
HDLBP-238ENST00000479894 ZSCAN4Q8NAM6 433 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-238ENST00000479894 DNAAF1Q8NEP3 725 aa12.88□□□□□ -0.35
HDLBP-238ENST00000479894 OR5P3Q8WZ94 311 aa12.88□□□□□ -0.35
HDLBP-238ENST00000479894 RNF170Q96K19 258 aa12.88□□□□□ -0.35
HDLBP-238ENST00000479894 PGLYRP3Q96LB9 341 aa12.88□□□□□ -0.35
HDLBP-238ENST00000479894 MRPS26Q9BYN8 205 aaKnown RBP12.88□□□□□ -0.35
HDLBP-238ENST00000479894 ZCCHC4Q9H5U6 513 aa12.88□□□□□ -0.35
HDLBP-238ENST00000479894 FN3KRPQ9HA64 309 aa12.88□□□□□ -0.35
HDLBP-238ENST00000479894 TRBV5-5A0A0J9YX44 114 aa12.87□□□□□ -0.35
HDLBP-238ENST00000479894 CEACAM18A8MTB9 384 aa12.87□□□□□ -0.35
HDLBP-238ENST00000479894 TNFRSF13BO14836 293 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-238ENST00000479894 GPR137BO60478 399 aa12.87□□□□□ -0.35
HDLBP-238ENST00000479894 RAB3AP20336 220 aa12.87□□□□□ -0.35
HDLBP-238ENST00000479894 FUT6P51993 359 aa12.87□□□□□ -0.35
HDLBP-238ENST00000479894 TMEM255AQ5JRV8 349 aa12.87□□□□□ -0.35
HDLBP-238ENST00000479894 ZFP41Q8N8Y5 198 aa12.87□□□□□ -0.35
HDLBP-238ENST00000479894 TMEM106AQ96A25 262 aa12.87□□□□□ -0.35
HDLBP-238ENST00000479894 OPALINQ96PE5 141 aa12.87□□□□□ -0.35
HDLBP-238ENST00000479894 OR2V2Q96R30 315 aa12.87□□□□□ -0.35
HDLBP-238ENST00000479894 NECAP2Q9NVZ3 263 aa12.87□□□□□ -0.35
HDLBP-238ENST00000479894 NDUFB11Q9NX14 153 aa12.87□□□□□ -0.35
HDLBP-238ENST00000479894 PPP1R3CQ9UQK1 317 aa12.87□□□□□ -0.35
HDLBP-238ENST00000479894 SIRT4Q9Y6E7 314 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-238ENST00000479894 PNMA8CA0A1B0GUJ8 204 aa12.86□□□□□ -0.35
HDLBP-238ENST00000479894 MEGF11A6BM72 1044 aa12.86□□□□□ -0.35
HDLBP-238ENST00000479894 TRIM64CA6NLI5 447 aa12.86□□□□□ -0.35
HDLBP-238ENST00000479894 H0YL77 283 aa12.86□□□□□ -0.35
HDLBP-238ENST00000479894 CYB5AP00167 134 aa12.86□□□□□ -0.35
HDLBP-238ENST00000479894 JUNBP17275 347 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-238ENST00000479894 ATP1B3P54709 279 aa12.86□□□□□ -0.35
HDLBP-238ENST00000479894 GNB2P62879 340 aa12.86□□□□□ -0.35
HDLBP-238ENST00000479894 NEDD8Q15843 81 aa12.86□□□□□ -0.35
HDLBP-238ENST00000479894 ZNF181Q2M3W8 571 aa12.86□□□□□ -0.35
HDLBP-238ENST00000479894 ACSM3Q53FZ2 586 aa12.86□□□□□ -0.35
HDLBP-238ENST00000479894 SPRNQ5BIV9 151 aa12.86□□□□□ -0.35
HDLBP-238ENST00000479894 GDPGP1Q6ZNW5 385 aa12.86□□□□□ -0.35
HDLBP-238ENST00000479894 OR10AD1Q8NGE0 317 aa12.86□□□□□ -0.35
HDLBP-238ENST00000479894 ZNF671Q8TAW3 534 aa12.86□□□□□ -0.35
HDLBP-238ENST00000479894 ITPKCQ96DU7 683 aa12.86□□□□□ -0.35
HDLBP-238ENST00000479894 BORCS8Q96FH0 119 aa12.86□□□□□ -0.35
HDLBP-238ENST00000479894 MEGF10Q96KG7 1140 aa12.86□□□□□ -0.35
HDLBP-238ENST00000479894 TMED9Q9BVK6 235 aa12.86□□□□□ -0.35
HDLBP-238ENST00000479894 FOXJ3Q9UPW0 622 aa12.86□□□□□ -0.35
HDLBP-238ENST00000479894 F5H5P2 479 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 MLNRO43193 412 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 SULT1B1O43704 296 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 GPX5O75715 221 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 PTBP3O95758 552 aaKnown RBP12.85□□□□□ -0.35
HDLBP-238ENST00000479894 ATF1P18846 271 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 ANOS1P23352 680 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 SOX2P48431 317 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 RBP2P50120 134 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 PSMD7P51665 324 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 PRSS12P56730 875 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 DOC2BQ14184 412 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 FAM76BQ5HYJ3 339 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 Q6ZSV7 163 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 LHFPL2Q6ZUX7 228 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 CEACAM19Q7Z692 300 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 CDH26Q8IXH8 852 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 Q8TCH9 128 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 ITLN1Q8WWA0 313 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 MUL1Q969V5 352 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 ADAT3Q96EY9 351 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-238ENST00000479894 TMEM138Q9NPI0 162 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 AURKAIP1Q9NWT8 199 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-238ENST00000479894 MIOXQ9UGB7 285 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 SCOCQ9UIL1 159 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 GSTK1Q9Y2Q3 226 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 POLDIP2Q9Y2S7 368 aa12.85□□□□□ -0.35
HDLBP-238ENST00000479894 A6NLC8 198 aa12.84□□□□□ -0.35
HDLBP-238ENST00000479894 ZNF732B4DXR9 585 aa12.84□□□□□ -0.35
HDLBP-238ENST00000479894 INMTO95050 263 aa12.84□□□□□ -0.35
HDLBP-238ENST00000479894 ALDOBP05062 364 aa12.84□□□□□ -0.35
HDLBP-238ENST00000479894 FSTP19883 344 aa12.84□□□□□ -0.35
HDLBP-238ENST00000479894 TGFBR2P37173 567 aa12.84□□□□□ -0.35
HDLBP-238ENST00000479894 RPS11P62280 158 aaKnown RBP eCLIP12.84□□□□□ -0.35
HDLBP-238ENST00000479894 HNRNPA0Q13151 305 aaKnown RBP12.84□□□□□ -0.35
HDLBP-238ENST00000479894 OR1M1Q8NGA1 313 aa12.84□□□□□ -0.35
HDLBP-238ENST00000479894 OR51A4Q8NGJ6 313 aa12.84□□□□□ -0.35
HDLBP-238ENST00000479894 DERL3Q96Q80 235 aa12.84□□□□□ -0.35
HDLBP-238ENST00000479894 OR14A2Q96R54 314 aa12.84□□□□□ -0.35
HDLBP-238ENST00000479894 NUDT16L1Q9BRJ7 211 aaKnown RBP12.84□□□□□ -0.35
HDLBP-238ENST00000479894 PCDHB16Q9NRJ7 776 aa12.84□□□□□ -0.35
HDLBP-238ENST00000479894 GPR173Q9NS66 373 aa12.84□□□□□ -0.35
HDLBP-238ENST00000479894 SSR3Q9UNL2 185 aa12.84□□□□□ -0.35
HDLBP-238ENST00000479894 TRBV5-7A0A0A0MS05 114 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms