RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 TMEM138Q9NPI0 162 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 SNTG1Q9NSN8 517 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 RBFOX1Q9NWB1 397 aaKnown RBP5.82□□□□□ -1.48
LIMD1-204ENST00000474665 ZNF581Q9P0T4 197 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 METRNQ9UJH8 293 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 FOXJ3Q9UPW0 622 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 PPIAL4AQ9Y536 164 aa5.82□□□□□ -1.48
LIMD1-204ENST00000474665 LRRC30A6NM36 301 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 KDM4BO94953 1096 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 CDRT1O95170 752 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 GYPAP02724 150 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 MAS1P04201 325 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 IGHV4-31P0DP07 118 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 CALCBP10092 127 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 PSG2P11465 335 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 CD36P16671 472 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 BCL3P20749 454 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 PSMA1P25786 263 aaKnown RBP5.81□□□□□ -1.48
LIMD1-204ENST00000474665 BDKRB2P30411 391 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 FGF9P31371 208 aaPredicted RBP5.81□□□□□ -1.48
LIMD1-204ENST00000474665 PTGFRP43088 359 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 ALDH3B2P48448 385 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 POU3F4P49335 361 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 ATP1B3P54709 279 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 PAX2Q02962 417 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 ATPAF1Q5TC12 328 aaPredicted RBP5.81□□□□□ -1.48
LIMD1-204ENST00000474665 DDI2Q5TDH0 399 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 STUMQ69YW2 141 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 FAM166AQ6J272 317 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 SLC16A12Q6ZSM3 486 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 LHFPL2Q6ZUX7 228 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 Q8NFD4 153 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 OR4D6Q8NGJ1 314 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 OR13F1Q8NGS4 319 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 OR51F2Q8NH61 342 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 SGMS2Q8NHU3 365 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 PHYHIPQ92561 330 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 HPS1Q92902 700 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 SLC25A28Q96A46 364 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 DACT3Q96B18 629 aaPredicted RBP5.81□□□□□ -1.48
LIMD1-204ENST00000474665 MSI2Q96DH6 328 aaKnown RBP5.81□□□□□ -1.48
LIMD1-204ENST00000474665 TIMD4Q96H15 378 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 CCL13Q99616 98 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 CENPOQ9BU64 300 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 BEX2Q9BXY8 128 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 NAA50Q9GZZ1 169 aaKnown RBP5.81□□□□□ -1.48
LIMD1-204ENST00000474665 ZNF665Q9H7R5 613 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 CNTD2Q9H8S5 307 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 PATZ1Q9HBE1 687 aaKnown RBP5.81□□□□□ -1.48
LIMD1-204ENST00000474665 TXNL4BQ9NX01 149 aaKnown RBP5.81□□□□□ -1.48
LIMD1-204ENST00000474665 MAB21L2Q9Y586 359 aa5.81□□□□□ -1.48
LIMD1-204ENST00000474665 TRAV1-2A0A0B4J238 106 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 A0A1W2PP11 408 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 ISPDA4D126 451 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 RFPL4AA6NLU0 287 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 OR2AT4A6NND4 320 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 RFPL4AL1F8VTS6 287 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 HCKP08631 526 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 IRF2P14316 349 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 MUC1P15941 1255 aaPredicted RBP5.8□□□□□ -1.48
LIMD1-204ENST00000474665 GALP22466 123 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 GLRA1P23415 457 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 MAPK3P27361 379 aaPredicted RBP5.8□□□□□ -1.48
LIMD1-204ENST00000474665 CALRP27797 417 aaKnown RBP5.8□□□□□ -1.48
LIMD1-204ENST00000474665 ZNF93P35789 620 aaPredicted RBP5.8□□□□□ -1.48
LIMD1-204ENST00000474665 TGFBR1P36897 503 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 CEBPDP49716 269 aaPredicted RBP5.8□□□□□ -1.48
LIMD1-204ENST00000474665 OR10A3P58181 314 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 PPP3R1P63098 170 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 QRFPP83859 136 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 TRAM1Q15629 374 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 DGUOKQ16854 277 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 HSD17B12Q53GQ0 312 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 C1orf100Q5SVJ3 147 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 ELP2Q6IA86 826 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 C22orf42Q6IC83 251 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 ZNF788Q6ZQV5 615 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 DCDC5Q6ZRR9 648 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 PEG10Q86TG7 708 aaKnown RBP5.8□□□□□ -1.48
LIMD1-204ENST00000474665 SATL1Q86VE3 508 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 SAXO1Q8IYX7 474 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 C1orf87Q8N0U7 546 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 FAM216BQ8N7L0 139 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 ZSCAN4Q8NAM6 433 aaPredicted RBP5.8□□□□□ -1.48
LIMD1-204ENST00000474665 TMEM104Q8NE00 496 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 PXT1Q8NFP0 134 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 OR10K1Q8NGX5 313 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 ZNF671Q8TAW3 534 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 TNFAIP8L1Q8WVP5 186 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 C12orf43Q96C57 262 aaKnown RBP5.8□□□□□ -1.48
LIMD1-204ENST00000474665 CEP19Q96LK0 163 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 GAFA1Q96PS6 74 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 GAL3ST1Q99999 423 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 KCNK15Q9H427 330 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 HMG20AQ9NP66 347 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 MMP26Q9NRE1 261 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 NLKQ9UBE8 527 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 KAAG1Q9UBP8 84 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 STUB1Q9UNE7 303 aa5.8□□□□□ -1.48
LIMD1-204ENST00000474665 AK6Q9Y3D8 172 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms