RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 ZNF35P13682 527 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 CFPP27918 469 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 GNALP38405 381 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 UBE2NP61088 152 aaKnown RBP3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 GUCA2BQ16661 112 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 NRN1LQ496H8 165 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 SCGB2B2Q4G0G5 96 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 CARD17Q5XLA6 110 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 HIST2H2BCQ6DN03 193 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 C11orf88Q6PI97 169 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 TMED4Q7Z7H5 227 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 TMEM200AQ86VY9 491 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 WFDC8Q8IUA0 241 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 TMEM185AQ8NFB2 350 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 PXT1Q8NFP0 134 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 NANOS1Q8WY41 292 aaKnown RBP3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 BCL2L2Q92843 193 aaPredicted RBP3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 ULBP2Q9BZM5 246 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 CNTD2Q9H8S5 307 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 SEC61A2Q9H9S3 476 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 MED9Q9NWA0 146 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 MIOXQ9UGB7 285 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 OPN4Q9UHM6 478 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 ZNF230Q9UIE0 474 aaPredicted RBP3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 USP9YO00507 2555 aaPredicted RBP3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 LOC100509620A0A075B734 347 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 TMEM235A6NFC5 223 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 MPTX1A8MV57 137 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 ZNF736B4DX44 427 aaPredicted RBP3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 F5H5P2 479 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 SULT1C2O00338 296 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 LDLRAD4O15165 306 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 FARS2O95363 451 aaKnown RBP3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 CYB5AP00167 134 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 AMY2AP04746 511 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 ISG15P05161 165 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 THBDP07204 575 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 CD3EP07766 207 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 OR4E1P0C645 316 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 PGA4P0DJD7 388 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 PGA3P0DJD8 388 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 CD37P11049 281 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 CDAP32320 146 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 PTGFRP43088 359 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 MMP16P51512 607 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 ZNF133P52736 654 aaPredicted RBP3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 TAS2R19P59542 299 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 ACTBP60709 375 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 ACTG1P63261 375 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 ARF1P84077 181 aaKnown RBP3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 DHODHQ02127 395 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 SNTB1Q13884 538 aaKnown RBP3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 HIST3H3Q16695 136 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 PCK2Q16822 640 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 NKPD1Q17RQ9 610 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 CEACAM16Q2WEN9 425 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 CDNFQ49AH0 187 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 AKIRIN2Q53H80 203 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 DMRTC1Q5HYR2 192 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 THEM4Q5T1C6 240 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 C10orf128Q5T292 105 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 TMEM244Q5VVB8 128 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 ZNF660Q6AZW8 331 aaPredicted RBP3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 TMEM108Q6UXF1 575 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 ZNF813Q6ZN06 617 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 LDLRAD3Q86YD5 345 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 PUSL1Q8N0Z8 303 aaKnown RBP3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 BPIFB2Q8N4F0 458 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 PAQR4Q8N4S7 273 aaPredicted RBP3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 GVQW1Q8N7I0 195 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 FAM169BQ8N8A8 192 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 TMEM229BQ8NBD8 167 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 CHST4Q8NCG5 386 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 NOXO1Q8NFA2 376 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 OR1M1Q8NGA1 313 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 OR52N4Q8NGI2 321 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 THAP6Q8TBB0 222 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 RNF133Q8WVZ7 376 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 C11orf40Q8WZ69 217 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 FAM46BQ96A09 425 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 CMBLQ96DG6 245 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 SLAMF6Q96DU3 332 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 PIK3IP1Q96FE7 263 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 ALKBH3Q96Q83 286 aaPredicted RBP3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 SLC6A7Q99884 636 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 PDCD10Q9BUL8 212 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 TMPRSS13Q9BYE2 586 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 PBOV1Q9GZY1 135 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 ALX4Q9H161 411 aaPredicted RBP3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 CRLF2Q9HC73 371 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 SLC25A15Q9Y619 301 aa3.61□□□□□ -1.83
GAPVD1-216ENST00000474637 ICE1Q9Y2F5 2266 aa3.6□□□□□ -1.83
GAPVD1-216ENST00000474637 TMEM82A0PJX8 343 aa3.6□□□□□ -1.83
GAPVD1-216ENST00000474637 PQLC2LA1A4F0 135 aa3.6□□□□□ -1.83
GAPVD1-216ENST00000474637 METTL21EPA6NDL7 271 aa3.6□□□□□ -1.83
GAPVD1-216ENST00000474637 HMSDA8MTL9 139 aa3.6□□□□□ -1.83
GAPVD1-216ENST00000474637 DEFB108AA8MXU0 73 aa3.6□□□□□ -1.83
GAPVD1-216ENST00000474637 RAB27BO00194 218 aa3.6□□□□□ -1.83
GAPVD1-216ENST00000474637 DHHO43323 396 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms