RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 ARL5AQ9Y689 179 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 PLXNA3P51805 1871 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 KMT2EQ8IZD2 1858 aa4.49□□□□□ -1.69
TMEM39A-206ENST00000473684 MAP1LC3B2A6NCE7 125 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 J3QR06 171 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 M0QYG6 137 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 SEMA4FO95754 770 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 CLEC3BP05452 202 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 OR4Q2P0C623 313 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 PPIAL4GP0DN37 164 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 ADORA2BP29275 332 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 RPL12P30050 165 aaKnown RBP4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 NTSP30990 170 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 GDF5P43026 501 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 RAB9AP51151 201 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 CNN1P51911 297 aaKnown RBP4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 SIRPAP78324 504 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 ZNF85Q03923 595 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 LRRC10Q5BKY1 277 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 TCTEX1D4Q5JR98 221 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 CLEC12AQ5QGZ9 265 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 Q6ZN92 141 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 TEX26Q8N6G2 289 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 B3GALNT2Q8NCR0 500 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 BHLHE23Q8NDY6 225 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 DVL3Q92997 716 aaPredicted RBP4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 NEIL2Q969S2 332 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 SPSB4Q96A44 273 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 BTF3L4Q96K17 158 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 C2orf50Q96LR7 162 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 CD180Q99467 661 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 TBX5Q99593 518 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 MAP1LC3BQ9GZQ8 125 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 OBP2BQ9NPH6 170 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 MBNL1Q9NR56 388 aaKnown RBP4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 SLC2A4RGQ9NR83 387 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 CMC2Q9NRP2 79 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 TMEM38BQ9NVV0 291 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 ZNF586Q9NXT0 402 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 NAT8Q9UHE5 227 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 PADI3Q9ULW8 664 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 WSB1Q9Y6I7 421 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 PLXNA1Q9UIW2 1896 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 TRAV18A0A075B6X5 111 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 PPIAL4EA0A075B759 164 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 PPIAL4CA0A0B4J2A2 164 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 SMIM35A0A1B0GVV1 85 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 GAGE12BA1L429 117 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 MANSC4A6NHS7 340 aaPredicted RBP4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 C4orf47A7E2U8 309 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 NPIPB6E9PJ23 425 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 PPIAL4DF5H284 164 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 MTX2O75431 263 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 CH25HO95992 272 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 CTSDP07339 412 aaPredicted RBP4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 PPIAL4FP0DN26 164 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 TCN2P20062 427 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 GABRA3P34903 492 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 CTRLP40313 264 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 HMGCS2P54868 508 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 TPPP2P59282 170 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 RAB31Q13636 194 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 MBOAT2Q6ZWT7 520 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 COX15Q7KZN9 410 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 MDGA2Q7Z553 956 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 TMEM150AQ86TG1 271 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 CCDC71LQ8N9Z2 235 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 APCDD1LQ8NCL9 501 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 OR52L1Q8NGH7 329 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 OR4P4Q8NGL7 312 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 PTPMT1Q8WUK0 201 aaPredicted RBP4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 PTX4Q96A99 478 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 SLAMF6Q96DU3 332 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 GUCD1Q96NT3 240 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 SLC46A1Q96NT5 459 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 SEMA3CQ99985 751 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 RAB11FIP5Q9BXF6 653 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 CDT1Q9H211 546 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 ZDHHC6Q9H6R6 413 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 G6PC2Q9NQR9 355 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 FLRT3Q9NZU0 649 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 ABI3Q9P2A4 366 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 CLEC4EQ9ULY5 219 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 CHD3Q12873 2000 aaKnown RBP4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 SCN8AQ9UQD0 1980 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 TRBV2A0A0J9YWF9 115 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 ZNF716A6NP11 495 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 PIN1P1O15428 100 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 GNG7O60262 68 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 TYMSP04818 313 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 PFN1P07737 140 aaKnown RBP4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 IGLC2P0DOY2 106 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 IGLC3P0DOY3 106 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 ESDP10768 282 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 KLK2P20151 261 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 FCGR2CP31995 323 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 P2RY1P47900 373 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 PRLHRP49683 370 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 RND3P61587 244 aa4.48□□□□□ -1.69
TMEM39A-206ENST00000473684 RPL23AP62750 156 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms