RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 KRTCAP3Q53RY4 240 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 LIN54Q6MZP7 749 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 ASCL4Q6XD76 172 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 NOXA1Q86UR1 476 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 LIX1LQ8IVB5 337 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 ADAD2Q8NCV1 583 aaKnown RBP5.32□□□□□ -1.56
CLK1-210ENST00000473565 GRPEL2Q8TAA5 225 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 MARCH1Q8TCQ1 289 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 KLF14Q8TD94 323 aaPredicted RBP5.32□□□□□ -1.56
CLK1-210ENST00000473565 GTF3AQ92664 365 aaKnown RBP5.32□□□□□ -1.56
CLK1-210ENST00000473565 NUDT16L1Q9BRJ7 211 aaKnown RBP5.32□□□□□ -1.56
CLK1-210ENST00000473565 TMPRSS13Q9BYE2 586 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 MSL2Q9HCI7 577 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 PRR13Q9NZ81 148 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 MGAT4CQ9UBM8 478 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 Q9UFV3 132 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 PLEKHA6Q9Y2H5 1048 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 ACACBO00763 2458 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 DISC1C4P0D8 188 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 ATXN7O15265 892 aaPredicted RBP5.32□□□□□ -1.56
CLK1-210ENST00000473565 AKR7A2O43488 359 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 CNOT4O95628 575 aaKnown RBP5.32□□□□□ -1.56
CLK1-210ENST00000473565 IFNA6P05013 189 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 GRPP07492 148 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 ZNF35P13682 527 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 RAG2P55895 527 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 MRPL49Q13405 166 aaKnown RBP5.32□□□□□ -1.56
CLK1-210ENST00000473565 PNLIPRP3Q17RR3 467 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 ZBTB37Q5TC79 503 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 METTL11BQ5VVY1 283 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 CD276Q5ZPR3 534 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 VHLLQ6RSH7 139 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 BEND4Q6ZU67 534 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 LRP11Q86VZ4 500 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 TCTE3Q8IZS6 198 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 PXT1Q8NFP0 134 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 OR11H4Q8NGC9 324 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 CPNE2Q96FN4 548 aaPredicted RBP5.32□□□□□ -1.56
CLK1-210ENST00000473565 SLX1AQ9BQ83 275 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 ZNF442Q9H7R0 627 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 SCP2D1Q9UJQ7 156 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 SLC25A15Q9Y619 301 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 CACNA1DQ01668 2161 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 CFAP46Q8IYW2 2715 aa5.32□□□□□ -1.56
CLK1-210ENST00000473565 DCHS2Q6V1P9 2916 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 IGHV2OR16-5A0A0B4J2B6 119 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 PRRG2O14669 202 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 CREBL2O60519 120 aaPredicted RBP5.31□□□□□ -1.56
CLK1-210ENST00000473565 TFF1P04155 84 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 OR4E1P0C645 316 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 PRKACAP17612 351 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 TSPAN5P62079 268 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 IFITM2Q01629 132 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 SNTB1Q13884 538 aaKnown RBP5.31□□□□□ -1.56
CLK1-210ENST00000473565 P2RY6Q15077 328 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 ZNF626Q68DY1 528 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 FBXW12Q6X9E4 464 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 ZNF826PQ6ZT77 177 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 NLRC3Q7RTR2 1065 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 FTMTQ8N4E7 242 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 C1orf162Q8NEQ5 155 aaPredicted RBP5.31□□□□□ -1.56
CLK1-210ENST00000473565 OR5A2Q8NGI9 324 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 OR5H2Q8NGV7 314 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 OR13G1Q8NGZ3 307 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 MARS2Q96GW9 593 aaKnown RBP5.31□□□□□ -1.56
CLK1-210ENST00000473565 CMSS1Q9BQ75 279 aaKnown RBP5.31□□□□□ -1.56
CLK1-210ENST00000473565 OCSTAMPQ9BR26 566 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 ADAT1Q9BUB4 502 aaKnown RBP5.31□□□□□ -1.56
CLK1-210ENST00000473565 EHFQ9NZC4 300 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 COL12A1Q99715 3063 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 SPTBN1Q01082 2364 aaKnown RBP5.31□□□□□ -1.56
CLK1-210ENST00000473565 FAM172BPA6NC97 362 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 SERPINE3A8MV23 424 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 F5H5P2 479 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 TRAPPC2LH3BP13 241 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 CDIPTO14735 213 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 MLNRO43193 412 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 ZNF780AO75290 641 aaPredicted RBP5.31□□□□□ -1.56
CLK1-210ENST00000473565 AKR1C4P17516 323 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 CEACAM8P31997 349 aaPredicted RBP5.31□□□□□ -1.56
CLK1-210ENST00000473565 CCKARP32238 428 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 TIMP3P35625 211 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 IKZF1Q13422 519 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 MEF2DQ14814 521 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 DCAF12L2Q5VW00 463 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 HOGA1Q86XE5 327 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 ZSCAN4Q8NAM6 433 aaPredicted RBP5.31□□□□□ -1.56
CLK1-210ENST00000473565 CASTOR1Q8WTX7 329 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 LIME1Q9H400 295 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 OBP2BQ9NPH6 170 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 ANAPC10Q9UM13 185 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 MEIKINA0A087WXM9 373 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 CCSO14618 274 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 HS3ST1O14792 307 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 PRAF2O60831 178 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 PDCD6O75340 191 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 IGLV1-44P01699 117 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 ANXA3P12429 323 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 NAT1P18440 290 aa5.31□□□□□ -1.56
CLK1-210ENST00000473565 OR3A3P47888 321 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms