RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 EGFL6Q8IUX8 553 aa12.81□□□□□ -0.36
MRPL55-226ENST00000473066 PACRGLQ8N7B6 248 aa12.81□□□□□ -0.36
MRPL55-226ENST00000473066 OR52I1Q8NGK6 324 aa12.81□□□□□ -0.36
MRPL55-226ENST00000473066 TSEN15Q8WW01 171 aaKnown RBP12.81□□□□□ -0.36
MRPL55-226ENST00000473066 OPALINQ96PE5 141 aa12.81□□□□□ -0.36
MRPL55-226ENST00000473066 FAM234AQ9H0X4 552 aa12.81□□□□□ -0.36
MRPL55-226ENST00000473066 ERVK13-1Q9NX77 482 aa12.81□□□□□ -0.36
MRPL55-226ENST00000473066 IGKV1-27A0A075B6S5 117 aa12.8□□□□□ -0.36
MRPL55-226ENST00000473066 A0A1W2PRD5 423 aa12.8□□□□□ -0.36
MRPL55-226ENST00000473066 A0A1W2PRF3 423 aa12.8□□□□□ -0.36
MRPL55-226ENST00000473066 A0A1W2PRM7 423 aa12.8□□□□□ -0.36
MRPL55-226ENST00000473066 OR4C45A6NMZ5 311 aa12.8□□□□□ -0.36
MRPL55-226ENST00000473066 RNASEK-C17orf49H0YIS7 233 aa12.8□□□□□ -0.36
MRPL55-226ENST00000473066 CHRM2P08172 466 aa12.8□□□□□ -0.36
MRPL55-226ENST00000473066 ERVK11-1P61568 191 aa12.8□□□□□ -0.36
MRPL55-226ENST00000473066 MED21Q13503 144 aa12.8□□□□□ -0.36
MRPL55-226ENST00000473066 GDPD3Q7L5L3 318 aa12.8□□□□□ -0.36
MRPL55-226ENST00000473066 LDLRAD3Q86YD5 345 aa12.8□□□□□ -0.36
MRPL55-226ENST00000473066 Q8N7P7 452 aa12.8□□□□□ -0.36
MRPL55-226ENST00000473066 OR13C9Q8NGT0 318 aa12.8□□□□□ -0.36
MRPL55-226ENST00000473066 OR5AK2Q8NH90 309 aa12.8□□□□□ -0.36
MRPL55-226ENST00000473066 DPAGT1Q9H3H5 408 aa12.8□□□□□ -0.36
MRPL55-226ENST00000473066 C19orf12Q9NSK7 152 aa12.8□□□□□ -0.36
MRPL55-226ENST00000473066 GLS2Q9UI32 602 aa12.8□□□□□ -0.36
MRPL55-226ENST00000473066 PCDHGB5Q9Y5G0 923 aa12.8□□□□□ -0.36
MRPL55-226ENST00000473066 ANGPTL7O43827 346 aa12.79□□□□□ -0.36
MRPL55-226ENST00000473066 TK1P04183 234 aa12.79□□□□□ -0.36
MRPL55-226ENST00000473066 MYL12AP19105 171 aa12.79□□□□□ -0.36
MRPL55-226ENST00000473066 PEX2P28328 305 aa12.79□□□□□ -0.36
MRPL55-226ENST00000473066 UBE2E1P51965 193 aa12.79□□□□□ -0.36
MRPL55-226ENST00000473066 COL10A1Q03692 680 aa12.79□□□□□ -0.36
MRPL55-226ENST00000473066 PRB3Q04118 309 aaPredicted RBP12.79□□□□□ -0.36
MRPL55-226ENST00000473066 ZNF691Q5VV52 312 aa12.79□□□□□ -0.36
MRPL55-226ENST00000473066 TMPRSS11AQ6ZMR5 421 aa12.79□□□□□ -0.36
MRPL55-226ENST00000473066 DHRSXQ8N5I4 330 aa12.79□□□□□ -0.36
MRPL55-226ENST00000473066 ZSCAN4Q8NAM6 433 aaPredicted RBP12.79□□□□□ -0.36
MRPL55-226ENST00000473066 OR10AC1Q8NH08 325 aa12.79□□□□□ -0.36
MRPL55-226ENST00000473066 APH1BQ8WW43 257 aa12.79□□□□□ -0.36
MRPL55-226ENST00000473066 RNF166Q96A37 237 aaPredicted RBP12.79□□□□□ -0.36
MRPL55-226ENST00000473066 CPNE2Q96FN4 548 aaPredicted RBP12.79□□□□□ -0.36
MRPL55-226ENST00000473066 CHIAQ9BZP6 476 aa12.79□□□□□ -0.36
MRPL55-226ENST00000473066 VCXQ9H320 206 aa12.79□□□□□ -0.36
MRPL55-226ENST00000473066 ISG20L2Q9H9L3 353 aaKnown RBP12.79□□□□□ -0.36
MRPL55-226ENST00000473066 UNKLQ9H9P5 680 aaKnown RBP12.79□□□□□ -0.36
MRPL55-226ENST00000473066 MRPS18AQ9NVS2 196 aaKnown RBP12.79□□□□□ -0.36
MRPL55-226ENST00000473066 MTCH1Q9NZJ7 389 aa12.79□□□□□ -0.36
MRPL55-226ENST00000473066 DHDHQ9UQ10 334 aa12.79□□□□□ -0.36
MRPL55-226ENST00000473066 SF3B6Q9Y3B4 125 aaKnown RBP12.79□□□□□ -0.36
MRPL55-226ENST00000473066 TRBV2A0A0J9YWF9 115 aa12.78□□□□□ -0.36
MRPL55-226ENST00000473066 MEIOCA2RUB1 952 aa12.78□□□□□ -0.36
MRPL55-226ENST00000473066 FAM181BA6NEQ2 426 aa12.78□□□□□ -0.36
MRPL55-226ENST00000473066 HCKP08631 526 aa12.78□□□□□ -0.36
MRPL55-226ENST00000473066 PIPP12273 146 aaPredicted RBP12.78□□□□□ -0.36
MRPL55-226ENST00000473066 PRKACAP17612 351 aa12.78□□□□□ -0.36
MRPL55-226ENST00000473066 DCKP27707 260 aa12.78□□□□□ -0.36
MRPL55-226ENST00000473066 SAA4P35542 130 aa12.78□□□□□ -0.36
MRPL55-226ENST00000473066 DLX1P56177 255 aa12.78□□□□□ -0.36
MRPL55-226ENST00000473066 EDDM3BP56851 147 aa12.78□□□□□ -0.36
MRPL55-226ENST00000473066 RPL15P61313 204 aaKnown RBP12.78□□□□□ -0.36
MRPL55-226ENST00000473066 ACSM1Q08AH1 577 aa12.78□□□□□ -0.36
MRPL55-226ENST00000473066 PIP4P2Q8N4L2 257 aa12.78□□□□□ -0.36
MRPL55-226ENST00000473066 OR4M1Q8NGD0 313 aa12.78□□□□□ -0.36
MRPL55-226ENST00000473066 OR51A4Q8NGJ6 313 aa12.78□□□□□ -0.36
MRPL55-226ENST00000473066 OR4F5Q8NH21 305 aa12.78□□□□□ -0.36
MRPL55-226ENST00000473066 PPP1R35Q8TAP8 253 aa12.78□□□□□ -0.36
MRPL55-226ENST00000473066 CNIH3Q8TBE1 160 aa12.78□□□□□ -0.36
MRPL55-226ENST00000473066 RFT1Q96AA3 541 aa12.78□□□□□ -0.36
MRPL55-226ENST00000473066 ZCCHC4Q9H5U6 513 aa12.78□□□□□ -0.36
MRPL55-226ENST00000473066 HEXA-AS1Q9H8Q6 139 aa12.78□□□□□ -0.36
MRPL55-226ENST00000473066 FGF20Q9NP95 211 aaPredicted RBP12.78□□□□□ -0.36
MRPL55-226ENST00000473066 CHCHD3Q9NX63 227 aaKnown RBP12.78□□□□□ -0.36
MRPL55-226ENST00000473066 IGKV1-9A0A0C4DH69 117 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 A0A1B0GUS0 222 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 K7N7A8 449 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 SPRY1O43609 319 aaPredicted RBP12.77□□□□□ -0.37
MRPL55-226ENST00000473066 WBP4O75554 376 aaKnown RBP12.77□□□□□ -0.37
MRPL55-226ENST00000473066 CLIC3O95833 236 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 HAND1O96004 215 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 IGHV4-59P01825 116 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 CD2P06729 351 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 BCL3P20749 454 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 GABRR1P24046 479 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 SNU13P55769 128 aaKnown RBP12.77□□□□□ -0.37
MRPL55-226ENST00000473066 RAG2P55895 527 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 ERVFRD-1P60508 538 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 IL18R1Q13478 541 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 SMN1Q16637 294 aaKnown RBP12.77□□□□□ -0.37
MRPL55-226ENST00000473066 SPIN3Q5JUX0 258 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 SHISA2Q6UWI4 295 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 OR8H2Q8N162 312 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 FAM58AQ8N1B3 248 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 OR5D14Q8NGL3 314 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 DYRK2Q92630 601 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 SNX22Q96L94 193 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 PDCD1LG2Q9BQ51 273 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 JAM3Q9BX67 310 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 RBFOX1Q9NWB1 397 aaKnown RBP12.77□□□□□ -0.37
MRPL55-226ENST00000473066 ZNRD1Q9P1U0 126 aa12.77□□□□□ -0.37
MRPL55-226ENST00000473066 EXOSC1Q9Y3B2 195 aaKnown RBP12.77□□□□□ -0.37
MRPL55-226ENST00000473066 POM121CA8CG34 1229 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms