RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 SCGB3A2Q96PL1 93 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 SLC7A5P2Q9GIP4 190 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 PRORYQ9H606 182 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 REEP1Q9H902 201 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 LYARQ9NX58 379 aaKnown RBP0.16□□□□□ -2.38
COMMD3-209ENST00000471350 BABAM2Q9NXR7 383 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 PTTG3PQ9NZH4 202 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 ADAMTS7Q9UKP4 1686 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 SLIT2O94813 1529 aa0.16□□□□□ -2.38
COMMD3-209ENST00000471350 RTEL1-TNFRSF6BF6WH68 1400 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 CCDC88CQ9P219 2028 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 IGLV3-9A0A075B6K5 115 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 COX7A2P2O60397 106 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 AGTP01019 485 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 GUSBP08236 651 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 PSKH1P11801 424 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 HNMTP50135 292 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 ACTR1AP61163 376 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 SLC35A1P78382 337 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 PMVKQ15126 192 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 SSX1Q16384 188 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 TMEM241Q24JQ0 296 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 DEFB115Q30KQ5 88 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 ATP6AP1LQ52LC2 224 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 ZNF773Q6PK81 442 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 CENPQQ7L2Z9 268 aaPredicted RBP0.15□□□□□ -2.39
COMMD3-209ENST00000471350 CYB561A3Q8NBI2 242 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 OR4C5Q8NGB2 326 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 OR51F2Q8NH61 342 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 OR4A5Q8NH83 315 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 RNF133Q8WVZ7 376 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 FBXO32Q969P5 355 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 HIST1H2BAQ96A08 127 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 MTG1Q9BT17 334 aaPredicted RBP0.15□□□□□ -2.39
COMMD3-209ENST00000471350 AP3M1Q9Y2T2 418 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 INSIG2Q9Y5U4 225 aa0.15□□□□□ -2.39
COMMD3-209ENST00000471350 SYNE2Q8WXH0 6885 aaKnown RBP0.14□□□□□ -2.39
COMMD3-209ENST00000471350 MROH7Q68CQ1 1323 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 SIGLEC1Q9BZZ2 1709 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 IGKV2D-26A0A0A0MRZ7 120 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 IGKV1-9A0A0C4DH69 117 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 MUC21A0A0G2JKD1 596 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 A0A0J9YX75 114 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 MUC21A0A140T8X8 626 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 EEF1E1O43324 174 aaKnown RBP0.14□□□□□ -2.39
COMMD3-209ENST00000471350 XRCC2O43543 280 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 RNF13O43567 381 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 TDP2O95551 362 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 HLA-HP01893 362 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 CRABP1P29762 137 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 ARL2P36404 184 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 RGS8P57771 180 aaPredicted RBP0.14□□□□□ -2.39
COMMD3-209ENST00000471350 ACTR3P61158 418 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 KRTAP21-1Q3LI58 79 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 UBE2NLQ5JXB2 153 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 CASC1Q6TDU7 716 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 DPPA2Q7Z7J5 298 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 FAM228AQ86W67 206 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 COA5Q86WW8 74 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 CYP4Z2PQ8N1L4 340 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 OR10P1Q8NGE3 313 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 OR13C2Q8NGS9 318 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 ITFG1Q8TB96 612 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 UBA3Q8TBC4 463 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 SMIM8Q96KF7 97 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 LOXHD1Q8IVV2 1947 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 GPR98Q8WXG9 6306 aa0.14□□□□□ -2.39
COMMD3-209ENST00000471350 A0A0G2JQZ4 141 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 KBTBD11-OT1A0A1B0GTJ5 212 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 SLC22A20A6NK97 555 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 CXCL11O14625 94 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 KRT14P02533 472 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 SCGB1C2P0DMR2 95 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 ZNF7P17097 686 aaPredicted RBP0.13□□□□□ -2.39
COMMD3-209ENST00000471350 MAGEA1P43355 309 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 RPL18AQ02543 176 aaKnown RBP0.13□□□□□ -2.39
COMMD3-209ENST00000471350 PLCXD2Q0VAA5 305 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 IDI1Q13907 227 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 TWF2Q6IBS0 349 aaKnown RBP0.13□□□□□ -2.39
COMMD3-209ENST00000471350 CLEC19AQ6UXS0 136 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 SCXQ7RTU7 201 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 LINC00596Q86U02 117 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 NIT1Q86X76 327 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 OR2K2Q8NGT1 345 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 OR6K6Q8NGW6 343 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 SCGB1C1Q8TD33 95 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 TMBIM1Q969X1 311 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 TPD52L3Q96J77 140 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 CAPZA3Q96KX2 299 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 TSGA13Q96PP4 275 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 OR2M4Q96R27 311 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 TGS1Q96RS0 853 aaKnown RBP0.13□□□□□ -2.39
COMMD3-209ENST00000471350 AGMATQ9BSE5 352 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 COX16Q9P0S2 106 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 VAX2Q9UIW0 290 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 KLF13Q9Y2Y9 288 aaPredicted RBP0.13□□□□□ -2.39
COMMD3-209ENST00000471350 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.13□□□□□ -2.39
COMMD3-209ENST00000471350 BRCA1P38398 1863 aaKnown RBP0.13□□□□□ -2.39
COMMD3-209ENST00000471350 CLUHO75153 1309 aa0.13□□□□□ -2.39
COMMD3-209ENST00000471350 IGKV3-7A0A075B6H7 116 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms