RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 VGLL3A8MV65 326 aa15.49■□□□□ 0.07
COL9A3-206ENST00000466532 ZNF737O75373 536 aa15.49■□□□□ 0.07
COL9A3-206ENST00000466532 GATBO75879 557 aaKnown RBP15.49■□□□□ 0.07
COL9A3-206ENST00000466532 INMTO95050 263 aa15.49■□□□□ 0.07
COL9A3-206ENST00000466532 APOL3O95236 402 aa15.49■□□□□ 0.07
COL9A3-206ENST00000466532 OR2T7P0C7T2 308 aa15.49■□□□□ 0.07
COL9A3-206ENST00000466532 ZNF728P0DKX0 622 aa15.49■□□□□ 0.07
COL9A3-206ENST00000466532 FASP25445 335 aa15.49■□□□□ 0.07
COL9A3-206ENST00000466532 RAB13P51153 203 aa15.49■□□□□ 0.07
COL9A3-206ENST00000466532 FUT6P51993 359 aa15.49■□□□□ 0.07
COL9A3-206ENST00000466532 FAM189A2Q15884 450 aa15.49■□□□□ 0.07
COL9A3-206ENST00000466532 OR10H4Q8NGA5 316 aa15.49■□□□□ 0.07
COL9A3-206ENST00000466532 FOXRED1Q96CU9 486 aaPredicted RBP15.49■□□□□ 0.07
COL9A3-206ENST00000466532 ADI1Q9BV57 179 aa15.49■□□□□ 0.07
COL9A3-206ENST00000466532 ABCB10Q9NRK6 738 aa15.49■□□□□ 0.07
COL9A3-206ENST00000466532 TCF19Q9Y242 345 aa15.49■□□□□ 0.07
COL9A3-206ENST00000466532 ODF3BA8MYP8 253 aa15.48■□□□□ 0.07
COL9A3-206ENST00000466532 G3V4G9 280 aa15.48■□□□□ 0.07
COL9A3-206ENST00000466532 RBP4P02753 201 aa15.48■□□□□ 0.07
COL9A3-206ENST00000466532 OPN1MWP04001 364 aa15.48■□□□□ 0.07
COL9A3-206ENST00000466532 OPN1MW2P0DN77 364 aa15.48■□□□□ 0.07
COL9A3-206ENST00000466532 OPN1MW3P0DN78 364 aa15.48■□□□□ 0.07
COL9A3-206ENST00000466532 IGHV1-8P0DP01 117 aa15.48■□□□□ 0.07
COL9A3-206ENST00000466532 HTR1FP30939 366 aa15.48■□□□□ 0.07
COL9A3-206ENST00000466532 SSX2Q16385 188 aa15.48■□□□□ 0.07
COL9A3-206ENST00000466532 KIAA2026Q5HYC2 2103 aa15.48■□□□□ 0.07
COL9A3-206ENST00000466532 ZNF626Q68DY1 528 aa15.48■□□□□ 0.07
COL9A3-206ENST00000466532 SLC25A26Q70HW3 274 aa15.48■□□□□ 0.07
COL9A3-206ENST00000466532 AMIGO2Q86SJ2 522 aa15.48■□□□□ 0.07
COL9A3-206ENST00000466532 OR8H2Q8N162 312 aa15.48■□□□□ 0.07
COL9A3-206ENST00000466532 MALSU1Q96EH3 234 aa15.48■□□□□ 0.07
COL9A3-206ENST00000466532 BORCS8Q96FH0 119 aa15.48■□□□□ 0.07
COL9A3-206ENST00000466532 CIB1Q99828 191 aa15.48■□□□□ 0.07
COL9A3-206ENST00000466532 CHST5Q9GZS9 411 aa15.48■□□□□ 0.07
COL9A3-206ENST00000466532 ZNF702PQ9H963 129 aa15.48■□□□□ 0.07
COL9A3-206ENST00000466532 SULT1C4O75897 302 aa15.47■□□□□ 0.07
COL9A3-206ENST00000466532 SERPINA3P01011 423 aa15.47■□□□□ 0.07
COL9A3-206ENST00000466532 DYNC1I2Q13409 638 aaKnown RBP15.47■□□□□ 0.07
COL9A3-206ENST00000466532 EDDM3AQ14507 147 aa15.47■□□□□ 0.07
COL9A3-206ENST00000466532 HABP2Q14520 560 aaPredicted RBP15.47■□□□□ 0.07
COL9A3-206ENST00000466532 CCBE1Q6UXH8 406 aaPredicted RBP15.47■□□□□ 0.07
COL9A3-206ENST00000466532 EGFL6Q8IUX8 553 aa15.47■□□□□ 0.07
COL9A3-206ENST00000466532 CCDC54Q8NEL0 328 aa15.47■□□□□ 0.07
COL9A3-206ENST00000466532 OR11H6Q8NGC7 330 aa15.47■□□□□ 0.07
COL9A3-206ENST00000466532 RPS4Y2Q8TD47 263 aa15.47■□□□□ 0.07
COL9A3-206ENST00000466532 EMG1Q92979 244 aaKnown RBP15.47■□□□□ 0.07
COL9A3-206ENST00000466532 SNX22Q96L94 193 aa15.47■□□□□ 0.07
COL9A3-206ENST00000466532 ZNF714Q96N38 554 aa15.47■□□□□ 0.07
COL9A3-206ENST00000466532 CDCA4Q9BXL8 241 aa15.47■□□□□ 0.07
COL9A3-206ENST00000466532 AP4S1Q9Y587 144 aa15.47■□□□□ 0.07
COL9A3-206ENST00000466532 TMEM82A0PJX8 343 aa15.46■□□□□ 0.07
COL9A3-206ENST00000466532 ATP6V1E1P36543 226 aa15.46■□□□□ 0.07
COL9A3-206ENST00000466532 POLR2IP36954 125 aaKnown RBP15.46■□□□□ 0.07
COL9A3-206ENST00000466532 CNN3Q15417 329 aaKnown RBP15.46■□□□□ 0.07
COL9A3-206ENST00000466532 BEAN1Q3B7T3 259 aa15.46■□□□□ 0.07
COL9A3-206ENST00000466532 LDLRAD2Q5SZI1 272 aa15.46■□□□□ 0.07
COL9A3-206ENST00000466532 TCF23Q7RTU1 214 aa15.46■□□□□ 0.07
COL9A3-206ENST00000466532 TMEM219Q86XT9 240 aa15.46■□□□□ 0.07
COL9A3-206ENST00000466532 LYG1Q8N1E2 194 aa15.46■□□□□ 0.07
COL9A3-206ENST00000466532 PRSS35Q8N3Z0 413 aa15.46■□□□□ 0.07
COL9A3-206ENST00000466532 SERTAD4Q9NUC0 356 aa15.46■□□□□ 0.07
COL9A3-206ENST00000466532 PITPNC1Q9UKF7 332 aa15.46■□□□□ 0.07
COL9A3-206ENST00000466532 LOC107986453A0A1B0GWG9 222 aa15.45■□□□□ 0.06
COL9A3-206ENST00000466532 hADV38S2A0JD32 116 aa15.45■□□□□ 0.06
COL9A3-206ENST00000466532 A6NDX4 124 aa15.45■□□□□ 0.06
COL9A3-206ENST00000466532 FBXO24O75426 580 aa15.45■□□□□ 0.06
COL9A3-206ENST00000466532 HAND1O96004 215 aa15.45■□□□□ 0.06
COL9A3-206ENST00000466532 FCGR1AP12314 374 aa15.45■□□□□ 0.06
COL9A3-206ENST00000466532 ACTA2P62736 377 aa15.45■□□□□ 0.06
COL9A3-206ENST00000466532 ACTG2P63267 376 aa15.45■□□□□ 0.06
COL9A3-206ENST00000466532 ACTC1P68032 377 aa15.45■□□□□ 0.06
COL9A3-206ENST00000466532 ACTA1P68133 377 aa15.45■□□□□ 0.06
COL9A3-206ENST00000466532 MEF2CQ06413 473 aaPredicted RBP15.45■□□□□ 0.06
COL9A3-206ENST00000466532 BNIP1Q12981 228 aa15.45■□□□□ 0.06
COL9A3-206ENST00000466532 FAM220AQ7Z4H9 259 aa15.45■□□□□ 0.06
COL9A3-206ENST00000466532 Q8N2B8 174 aa15.45■□□□□ 0.06
COL9A3-206ENST00000466532 TPRX1Q8N7U7 411 aa15.45■□□□□ 0.06
COL9A3-206ENST00000466532 OR8J1Q8NGP2 316 aa15.45■□□□□ 0.06
COL9A3-206ENST00000466532 C10orf35Q96D05 121 aa15.45■□□□□ 0.06
COL9A3-206ENST00000466532 CHST6Q9GZX3 395 aa15.45■□□□□ 0.06
COL9A3-206ENST00000466532 RIBC2Q9H4K1 309 aa15.45■□□□□ 0.06
COL9A3-206ENST00000466532 IL36RNQ9UBH0 155 aa15.45■□□□□ 0.06
COL9A3-206ENST00000466532 GNG8Q9UK08 70 aa15.45■□□□□ 0.06
COL9A3-206ENST00000466532 IGHA1P01876 353 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 UBCP0CG48 685 aaKnown RBP15.44■□□□□ 0.06
COL9A3-206ENST00000466532 GABRR1P24046 479 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 PEX2P28328 305 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 KIR3DL2P43630 455 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 ATP1B3P54709 279 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 OR12D2P58182 307 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 ZNF85Q03923 595 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 TMED1Q13445 227 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 GRK1Q15835 563 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 NSUN5P1Q3KNT7 163 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 TP53I3Q53FA7 332 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 SAMD5Q5TGI4 173 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 C1orf146Q5VVC0 180 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 Q8IYB0 196 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 ENTHD1Q8IYW4 607 aa15.44■□□□□ 0.06
COL9A3-206ENST00000466532 RDH10Q8IZV5 341 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms