RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 FAM90A13PP0C7W8 464 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 FAM90A14PP0C7W9 464 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 FAM90A24PP0C7X0 464 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 COX6B1P14854 86 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 GLRA1P23415 457 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 GATA4P43694 442 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 PTH2RP49190 550 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 IKZF1Q13422 519 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 IL13RA2Q14627 380 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 MPV17LQ2QL34 196 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 WDR82Q6UXN9 313 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 ZNF826PQ6ZT77 177 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 Q6ZTK2 550 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 C19orf18Q8NEA5 215 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 FCAMRQ8WWV6 532 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 HPS1Q92902 700 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 ERGIC1Q969X5 290 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 ABHD1Q96SE0 405 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 NRIP2Q9BQI9 281 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 CBLN4Q9NTU7 201 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 GLS2Q9UI32 602 aa10.27□□□□□ -0.77
VPS16-206ENST00000466415 PRR14LQ5THK1 2151 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 EPG5Q9HCE0 2579 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 TMEM235A6NFC5 223 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 LRRC30A6NM36 301 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 GABARAPH6UMI1 98 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 SOCS1O15524 211 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 NOS1APO75052 506 aaPredicted RBP10.26□□□□□ -0.77
VPS16-206ENST00000466415 HLA-DQB1P01920 261 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 ACAA1P09110 424 aaPredicted RBP10.26□□□□□ -0.77
VPS16-206ENST00000466415 GSTP1P09211 210 aaKnown RBP10.26□□□□□ -0.77
VPS16-206ENST00000466415 IL7P13232 177 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 HIST1H1DP16402 221 aaKnown RBP10.26□□□□□ -0.77
VPS16-206ENST00000466415 GNB3P16520 340 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 PRSS3P35030 304 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 PPOXP50336 477 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 DEFA1P59665 94 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 DEFA3P59666 94 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 GNG2P59768 71 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 CCL8P80075 99 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 MRPS15P82914 257 aaKnown RBP10.26□□□□□ -0.77
VPS16-206ENST00000466415 DGCR2P98153 550 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 SRSF1Q07955 248 aaKnown RBP eCLIP10.26□□□□□ -0.77
VPS16-206ENST00000466415 SWI5Q1ZZU3 235 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 SMIM21Q3B7S5 101 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 CDNFQ49AH0 187 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 NHLRC3Q5JS37 347 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 ATAD3CQ5T2N8 411 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 ZNF57Q68EA5 555 aaPredicted RBP10.26□□□□□ -0.77
VPS16-206ENST00000466415 C11orf53Q8IXP5 236 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 FAM89BQ8N5H3 189 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 BOLLQ8N9W6 283 aaKnown RBP10.26□□□□□ -0.77
VPS16-206ENST00000466415 Q8NFD4 153 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 SMIM4Q8WVI0 70 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 GCDHQ92947 438 aaPredicted RBP10.26□□□□□ -0.77
VPS16-206ENST00000466415 POM121Q96HA1 1249 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 SDHCQ99643 169 aaPredicted RBP10.26□□□□□ -0.77
VPS16-206ENST00000466415 VRK1Q99986 396 aaPredicted RBP10.26□□□□□ -0.77
VPS16-206ENST00000466415 AUNIPQ9H7T9 357 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 ZMAT3Q9HA38 289 aaKnown RBP10.26□□□□□ -0.77
VPS16-206ENST00000466415 PLEKHJ1Q9NW61 149 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 DNAJB11Q9UBS4 358 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 PPP1R3CQ9UQK1 317 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 HIVEP3Q5T1R4 2406 aa10.26□□□□□ -0.77
VPS16-206ENST00000466415 NBASA2RRP1 2371 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 F8VVB4 439 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 F8VWA3 439 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 SULT1C2O00338 296 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 GSTZ1O43708 216 aaPredicted RBP10.25□□□□□ -0.77
VPS16-206ENST00000466415 PDCD6O75340 191 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 CSF3P09919 207 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 PTHLHP12272 177 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 ZNF44P15621 663 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 SCN1BQ07699 218 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 ARFRP1Q13795 201 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 BAK1Q16611 211 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 PNLIPRP3Q17RR3 467 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 MST1LQ2TV78 715 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 ZNF260Q3ZCT1 412 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 SPIN3Q5JUX0 258 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 ZCCHC24Q8N2G6 241 aaKnown RBP10.25□□□□□ -0.77
VPS16-206ENST00000466415 NEK7Q8TDX7 302 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 ARHGAP5-AS1Q96IT6 56 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 THAP7Q9BT49 309 aaPredicted RBP10.25□□□□□ -0.77
VPS16-206ENST00000466415 PECRQ9BY49 303 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 RAB1BQ9H0U4 201 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 SCPEP1Q9HB40 452 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 SPACA1Q9HBV2 294 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 GCM1Q9NP62 436 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 RASL12Q9NYN1 266 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 RNF7Q9UBF6 113 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 IL36RNQ9UBH0 155 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 OR14J1Q9UGF5 321 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 NPTNQ9Y639 398 aa10.25□□□□□ -0.77
VPS16-206ENST00000466415 SMG1Q96Q15 3661 aaKnown RBP10.24□□□□□ -0.77
VPS16-206ENST00000466415 A0A1W2PQ09 198 aa10.24□□□□□ -0.77
VPS16-206ENST00000466415 SERPINE3A8MV23 424 aa10.24□□□□□ -0.77
VPS16-206ENST00000466415 SRRM5B3KS81 715 aa10.24□□□□□ -0.77
VPS16-206ENST00000466415 MFNGO00587 321 aa10.24□□□□□ -0.77
VPS16-206ENST00000466415 SH2D1BO14796 132 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms