RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 RPS11P62280 158 aaKnown RBP eCLIP11.23□□□□□ -0.61
SCAMP4-206ENST00000460767 GNB2P62879 340 aa11.23□□□□□ -0.61
SCAMP4-206ENST00000460767 SLC35A2P78381 396 aa11.23□□□□□ -0.61
SCAMP4-206ENST00000460767 IL24Q13007 206 aa11.23□□□□□ -0.61
SCAMP4-206ENST00000460767 C2orf68Q2NKX9 166 aa11.23□□□□□ -0.61
SCAMP4-206ENST00000460767 C6orf141Q5SZD1 244 aa11.23□□□□□ -0.61
SCAMP4-206ENST00000460767 ACP7Q6ZNF0 438 aa11.23□□□□□ -0.61
SCAMP4-206ENST00000460767 Q6ZPA2 131 aa11.23□□□□□ -0.61
SCAMP4-206ENST00000460767 LY6G5BQ8NDX9 201 aa11.23□□□□□ -0.61
SCAMP4-206ENST00000460767 LINC01006Q8NI28 216 aa11.23□□□□□ -0.61
SCAMP4-206ENST00000460767 PGLYRP3Q96LB9 341 aa11.23□□□□□ -0.61
SCAMP4-206ENST00000460767 GAFA1Q96PS6 74 aa11.23□□□□□ -0.61
SCAMP4-206ENST00000460767 DUSP21Q9H596 190 aa11.23□□□□□ -0.61
SCAMP4-206ENST00000460767 SEBOXQ9HB31 216 aaPredicted RBP11.23□□□□□ -0.61
SCAMP4-206ENST00000460767 PAK1IP1Q9NWT1 392 aaPredicted RBP11.23□□□□□ -0.61
SCAMP4-206ENST00000460767 BABAM2Q9NXR7 383 aa11.23□□□□□ -0.61
SCAMP4-206ENST00000460767 RASL12Q9NYN1 266 aa11.23□□□□□ -0.61
SCAMP4-206ENST00000460767 MAB21L2Q9Y586 359 aa11.23□□□□□ -0.61
SCAMP4-206ENST00000460767 SOX21Q9Y651 276 aaPredicted RBP11.23□□□□□ -0.61
SCAMP4-206ENST00000460767 KMT2CQ8NEZ4 4911 aaKnown RBP11.23□□□□□ -0.61
SCAMP4-206ENST00000460767 F8VVB4 439 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 F8VWA3 439 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 H3BSH0 61 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 DVL1O14640 695 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 GPR37O15354 613 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 SIGLEC5O15389 551 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 ATP6V1G2O95670 118 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 GBX2P52951 348 aaPredicted RBP11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 IRF3Q14653 427 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 DGUOKQ16854 277 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 KCTD8Q6ZWB6 473 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 RNF144BQ7Z419 303 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 FGFRL1Q8N441 504 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 BOLLQ8N9W6 283 aaKnown RBP11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 C8orf46Q8TAG6 207 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 ZNF671Q8TAW3 534 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 SSMEM1Q8WWF3 244 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 ZDHHC16Q969W1 377 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 SPSB1Q96BD6 273 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 FGGYQ96C11 551 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 SMIM19Q96E16 107 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 CCL13Q99616 98 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 PLEKHA1Q9HB21 404 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 MTCH1Q9NZJ7 389 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 NLKQ9UBE8 527 aa11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 LSM2Q9Y333 95 aaKnown RBP11.22□□□□□ -0.61
SCAMP4-206ENST00000460767 IGHV3OR16-10A0A075B7F0 116 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 TRBV5-5A0A0J9YX44 114 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 OR2AT4A6NND4 320 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 SLC1A7O00341 560 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 ECDO95905 644 aaPredicted RBP11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 CD1AP06126 327 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 MELTFP08582 738 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 SELLP14151 372 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 ATF1P18846 271 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 GLRA1P23415 457 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 ACSM1Q08AH1 577 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 SAMD5Q5TGI4 173 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 TMPRSS11AQ6ZMR5 421 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 ANGPTL5Q86XS5 388 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 CD177Q8N6Q3 437 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 FAM216BQ8N7L0 139 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 ZNF676Q8N7Q3 588 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 NANOGP1Q8N7R0 232 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 OR5AK2Q8NH90 309 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 SGCDQ92629 289 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 ZNF488Q96MN9 340 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 CDCA4Q9BXL8 241 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 RPUSD1Q9UJJ7 312 aaKnown RBP11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 POLDIP2Q9Y2S7 368 aa11.21□□□□□ -0.61
SCAMP4-206ENST00000460767 TRBV2A0A0J9YWF9 115 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 SERPINA3P01011 423 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 CDK1P06493 297 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 LIPFP07098 398 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 MYL12AP19105 171 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 AZGP1P25311 298 aaKnown RBP11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 RBP2P50120 134 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 CAV3P56539 151 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 ZP1P60852 638 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 CNN3Q15417 329 aaKnown RBP11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 GPR157Q5UAW9 335 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 CD276Q5ZPR3 534 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 IZUMO2Q6UXV1 221 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 BRD3OSQ6XYD6 125 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 AHSA2Q719I0 299 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 SLC36A1Q7Z2H8 476 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 BPIFB6Q8NFQ5 453 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 OR5T2Q8NGG2 359 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 NUDT16L1Q9BRJ7 211 aaKnown RBP11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 SIRPDQ9H106 197 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 RASSF4Q9H2L5 321 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 C16orf95Q9H693 158 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 TCF7L1Q9HCS4 588 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 SNTG1Q9NSN8 517 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 SLC7A11Q9UPY5 501 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 PCDHGB5Q9Y5G0 923 aa11.2□□□□□ -0.62
SCAMP4-206ENST00000460767 IGKV1-12A0A0C4DH73 117 aa11.19□□□□□ -0.62
SCAMP4-206ENST00000460767 ENSAO43768 121 aaKnown RBP11.19□□□□□ -0.62
SCAMP4-206ENST00000460767 ZNF737O75373 536 aa11.19□□□□□ -0.62
SCAMP4-206ENST00000460767 GPX5O75715 221 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms