RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 LIFP15018 202 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 PNLIPP16233 465 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 KCNJ3P48549 501 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 EIF2S3LQ2VIR3 472 aaKnown RBP10.59□□□□□ -0.71
CPNE6-202ENST00000460657 ZPBPQ9BS86 351 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 WDR13Q9H1Z4 485 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 NIT2Q9NQR4 276 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 RNF150Q9ULK6 438 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 PLXNA4Q9HCM2 1894 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 GRPP07492 148 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 PTAFRP25105 342 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 RAB13P51153 203 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 NDUFA6P56556 154 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 OR2B8PP59922 312 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 CBLN2Q8IUK8 224 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 OR2C3Q8N628 320 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 OR13G1Q8NGZ3 307 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 C17orf112F2Z3M2 114 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 KCNAB3O43448 404 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 DNPH1O43598 174 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 TIMM8AO60220 97 aaPredicted RBP10.59□□□□□ -0.71
CPNE6-202ENST00000460657 BAXQ07812 192 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 OR8G2PQ6IF36 304 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 LIAT1Q6ZQX7 453 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 THNSL2Q86YJ6 484 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 P4HTMQ9NXG6 502 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 GNG13Q9P2W3 67 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 PPP1R3CQ9UQK1 317 aa10.59□□□□□ -0.71
CPNE6-202ENST00000460657 GEMIN2O14893 280 aaKnown RBP10.58□□□□□ -0.72
CPNE6-202ENST00000460657 HMGB3O15347 200 aaKnown RBP10.58□□□□□ -0.72
CPNE6-202ENST00000460657 TRAF3IP2O43734 574 aaPredicted RBP10.58□□□□□ -0.72
CPNE6-202ENST00000460657 HNF4GQ14541 408 aa10.58□□□□□ -0.72
CPNE6-202ENST00000460657 FAM131CQ96AQ9 280 aa10.58□□□□□ -0.72
CPNE6-202ENST00000460657 TIMP4Q99727 224 aa10.58□□□□□ -0.72
CPNE6-202ENST00000460657 FAM173AQ9BQD7 235 aa10.58□□□□□ -0.72
CPNE6-202ENST00000460657 SLC26A1Q9H2B4 701 aa10.58□□□□□ -0.72
CPNE6-202ENST00000460657 LIN7CQ9NUP9 197 aaKnown RBP10.58□□□□□ -0.72
CPNE6-202ENST00000460657 TP53TG5Q9Y2B4 290 aa10.58□□□□□ -0.72
CPNE6-202ENST00000460657 SIRPB1O00241 398 aa10.58□□□□□ -0.72
CPNE6-202ENST00000460657 PRDX4Q13162 271 aa10.58□□□□□ -0.72
CPNE6-202ENST00000460657 SLC10A1Q14973 349 aa10.58□□□□□ -0.72
CPNE6-202ENST00000460657 TSPO2Q5TGU0 170 aa10.58□□□□□ -0.72
CPNE6-202ENST00000460657 RXFP4Q8TDU9 374 aa10.58□□□□□ -0.72
CPNE6-202ENST00000460657 SDSLQ96GA7 329 aa10.58□□□□□ -0.72
CPNE6-202ENST00000460657 NPAS1Q99742 590 aa10.58□□□□□ -0.72
CPNE6-202ENST00000460657 GNG12Q9UBI6 72 aa10.58□□□□□ -0.72
CPNE6-202ENST00000460657 MT-CO2P00403 227 aa10.58□□□□□ -0.72
CPNE6-202ENST00000460657 IGFBP3P17936 291 aaPredicted RBP10.58□□□□□ -0.72
CPNE6-202ENST00000460657 PDLIM3Q53GG5 364 aaPredicted RBP10.58□□□□□ -0.72
CPNE6-202ENST00000460657 TWSG1Q9GZX9 223 aa10.58□□□□□ -0.72
CPNE6-202ENST00000460657 HEXA-AS1Q9H8Q6 139 aa10.58□□□□□ -0.72
CPNE6-202ENST00000460657 SH2D1BO14796 132 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 PPP1R2P9O14990 202 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 ONECUT2O95948 504 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 IRF2P14316 349 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 P2RY1P47900 373 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 SPANXN5Q5MJ07 72 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 FAM27BQ5VT28 67 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 LCN15Q6UWW0 184 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 IP6K3Q96PC2 410 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 SLC2A9Q9NRM0 540 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 OR5AC2Q9NZP5 309 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 STARD10Q9Y365 291 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 MDC1Q14676 2089 aaKnown RBP10.57□□□□□ -0.72
CPNE6-202ENST00000460657 PRF1P14222 555 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 ASCL1P50553 236 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 ELLP55199 621 aaPredicted RBP10.57□□□□□ -0.72
CPNE6-202ENST00000460657 FAM219AQ8IW50 185 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 TMEM123Q8N131 208 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 SLC35B3Q9H1N7 401 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 CCDC187A0A096LP49 1063 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 FAM24AA6NFZ4 105 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 ADAM20O43506 726 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 MT-ND4LP03901 98 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 SERPINA7P05543 415 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 PSMB3P49720 205 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 GNG3P63215 75 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 ZNF239Q16600 458 aaKnown RBP10.57□□□□□ -0.72
CPNE6-202ENST00000460657 LTC4SQ16873 150 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 C1orf87Q8N0U7 546 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 OR2I1PQ8NGU4 316 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 FSCN3Q9NQT6 498 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 PARP11Q9NR21 331 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 TMEM38BQ9NVV0 291 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 H3BP45 60 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 MELTFP08582 738 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 HOXD4P09016 255 aaPredicted RBP10.57□□□□□ -0.72
CPNE6-202ENST00000460657 CCL4P13236 92 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 EDN3P14138 238 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 ZNF17P17021 662 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 MST1P26927 711 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 GABRA2P47869 451 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 UNC119Q13432 240 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 TESK1Q15569 626 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 DMBX1Q8NFW5 382 aa10.57□□□□□ -0.72
CPNE6-202ENST00000460657 HDHD3Q9BSH5 251 aaPredicted RBP10.57□□□□□ -0.72
CPNE6-202ENST00000460657 LOC101059948A0A1B0GTJ6 334 aa10.56□□□□□ -0.72
CPNE6-202ENST00000460657 SELEP16581 610 aa10.56□□□□□ -0.72
CPNE6-202ENST00000460657 OR8G1Q15617 311 aa10.56□□□□□ -0.72
CPNE6-202ENST00000460657 ADIRFQ15847 76 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms