RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 MBP02144 154 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 FGF5P12034 268 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 COX6A1P12074 109 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 CEACAM16Q2WEN9 425 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 FDX2Q6P4F2 183 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 DHRS13Q6UX07 377 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 BHLHE23Q8NDY6 225 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 CCDC54Q8NEL0 328 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 BORCS8Q96FH0 119 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 KIRREL1Q96J84 757 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 UNKLQ9H9P5 680 aaKnown RBP13.52□□□□□ -0.25
LMNB1-203ENST00000460265 R4GN57 208 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 C9orf170A2RU37 121 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 C10orf142B7Z368 130 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 LIFP15018 202 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 GSK3AP49840 483 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 CLDN15P56746 228 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 DHRS11Q6UWP2 260 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 CD300LFQ8TDQ1 290 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 ZNF845Q96IR2 970 aaPredicted RBP13.52□□□□□ -0.25
LMNB1-203ENST00000460265 PPP1R14DQ9NXH3 145 aa13.52□□□□□ -0.25
LMNB1-203ENST00000460265 RAB27BO00194 218 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 PPIHO43447 177 aaKnown RBP13.51□□□□□ -0.25
LMNB1-203ENST00000460265 CD74P04233 296 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 RFPL3SP0C7P2 107 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 CCL2P13500 99 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 GRB2P62993 217 aaKnown RBP13.51□□□□□ -0.25
LMNB1-203ENST00000460265 PPP1R1AQ13522 171 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 ATPAF1Q5TC12 328 aaPredicted RBP13.51□□□□□ -0.25
LMNB1-203ENST00000460265 UNQ6494/PRO21346Q6UXR6 183 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 NELFAQ9H3P2 528 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 IGHV3-64DA0A0J9YX35 117 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 HSPB6O14558 160 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 MRPL33O75394 65 aaKnown RBP13.51□□□□□ -0.25
LMNB1-203ENST00000460265 KLF7O75840 302 aaPredicted RBP13.51□□□□□ -0.25
LMNB1-203ENST00000460265 COX5BP10606 129 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 PAX6P26367 422 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 PTGDSP41222 190 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 ABHD3Q8WU67 409 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 SEMA5BQ9P283 1151 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 LPAR3Q9UBY5 353 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 CSAG2Q9Y5P2 127 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 CEP192Q8TEP8 1941 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 RAB6AP20340 208 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 RAB4BP61018 213 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 TMEM229BQ8NBD8 167 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 OR56B1Q8NGI3 324 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 SLCO5A1Q9H2Y9 848 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 KPTNQ9Y664 436 aa13.51□□□□□ -0.25
LMNB1-203ENST00000460265 VAMP5O95183 116 aa13.5□□□□□ -0.25
LMNB1-203ENST00000460265 HIST1H1BP16401 226 aaKnown RBP13.5□□□□□ -0.25
LMNB1-203ENST00000460265 NUBP1P53384 320 aa13.5□□□□□ -0.25
LMNB1-203ENST00000460265 PHYHD1Q5SRE7 291 aa13.5□□□□□ -0.25
LMNB1-203ENST00000460265 LPCAT3Q6P1A2 487 aa13.5□□□□□ -0.25
LMNB1-203ENST00000460265 SGCZQ96LD1 299 aa13.5□□□□□ -0.25
LMNB1-203ENST00000460265 PRR14LQ5THK1 2151 aa13.5□□□□□ -0.25
LMNB1-203ENST00000460265 TMEM265A0A087WTH1 108 aa13.5□□□□□ -0.25
LMNB1-203ENST00000460265 CCDC187A0A096LP49 1063 aa13.5□□□□□ -0.25
LMNB1-203ENST00000460265 CDX1P47902 265 aaPredicted RBP13.5□□□□□ -0.25
LMNB1-203ENST00000460265 UNC119Q13432 240 aa13.5□□□□□ -0.25
LMNB1-203ENST00000460265 ZNF239Q16600 458 aaKnown RBP13.5□□□□□ -0.25
LMNB1-203ENST00000460265 NSUN5P2Q63ZY6 315 aa13.5□□□□□ -0.25
LMNB1-203ENST00000460265 OR10D3Q8NH80 312 aa13.5□□□□□ -0.25
LMNB1-203ENST00000460265 CT55Q8WUE5 264 aa13.5□□□□□ -0.25
LMNB1-203ENST00000460265 MRPL13Q9BYD1 178 aaKnown RBP13.5□□□□□ -0.25
LMNB1-203ENST00000460265 PARPBPQ9NWS1 579 aa13.5□□□□□ -0.25
LMNB1-203ENST00000460265 A0A1W2PPE2 198 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 IGHMP01871 453 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 HOXA5P20719 270 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 PKIAP61925 76 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 RAC1P63000 192 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 C6orf201Q7Z4U5 140 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 PRDM13Q9H4Q3 707 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 ABI3Q9P2A4 366 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 DOCK10Q96BY6 2186 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 FBXO24O75426 580 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 BPNT1O95861 308 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 ZNF32P17041 273 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 OR2A2Q6IF42 318 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 ZNF529Q6P280 563 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 TMEM105Q8N8V8 129 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 ADAD2Q8NCV1 583 aaKnown RBP13.49□□□□□ -0.25
LMNB1-203ENST00000460265 CYYR1Q96J86 154 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 ZNF442Q9H7R0 627 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 WDR54Q9H977 334 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 ZNF385CQ66K41 422 aaPredicted RBP13.49□□□□□ -0.25
LMNB1-203ENST00000460265 SLC25A47Q6Q0C1 308 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 C1QL2Q7Z5L3 287 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 GUCD1Q96NT3 240 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 CDC6Q99741 560 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 PARP12Q9H0J9 701 aaKnown RBP13.49□□□□□ -0.25
LMNB1-203ENST00000460265 SPACA1Q9HBV2 294 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 SLC17A5Q9NRA2 495 aa13.49□□□□□ -0.25
LMNB1-203ENST00000460265 DIDO1Q9BTC0 2240 aaKnown RBP13.49□□□□□ -0.25
LMNB1-203ENST00000460265 MFNGO00587 321 aa13.48□□□□□ -0.25
LMNB1-203ENST00000460265 OR7C1O76099 320 aaPredicted RBP13.48□□□□□ -0.25
LMNB1-203ENST00000460265 ISG15P05161 165 aa13.48□□□□□ -0.25
LMNB1-203ENST00000460265 CHRM2P08172 466 aa13.48□□□□□ -0.25
LMNB1-203ENST00000460265 SCAND1P57086 179 aa13.48□□□□□ -0.25
LMNB1-203ENST00000460265 OR8G1Q15617 311 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms