RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 GUK1Q16774 197 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 ODF4Q2M2E3 257 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 CD276Q5ZPR3 534 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 SSX7Q7RTT5 188 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 ZNF573Q86YE8 665 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 FOXRED2Q8IWF2 684 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 BAP18Q8IXM2 172 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 C20orf196Q8IYI0 205 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 ZNF676Q8N7Q3 588 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 RPS4Y2Q8TD47 263 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 MITD1Q8WV92 249 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 RNF166Q96A37 237 aaPredicted RBP9.07□□□□□ -0.96
HERC4-207ENST00000460168 SLAMF6Q96DU3 332 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 VPS25Q9BRG1 176 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 URM1Q9BTM9 101 aaKnown RBP9.07□□□□□ -0.96
HERC4-207ENST00000460168 B3GAT2Q9NPZ5 323 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 PLEK2Q9NYT0 353 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 TMEM218A2RU14 115 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 OR14I1A6ND48 311 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 TMEM212A6NML5 194 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 ANXA2P2A6NMY6 339 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 MRPL33O75394 65 aaKnown RBP9.07□□□□□ -0.96
HERC4-207ENST00000460168 ARL6IP5O75915 188 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 IFNA21P01568 189 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 ZNF14P17017 642 aaPredicted RBP9.07□□□□□ -0.96
HERC4-207ENST00000460168 MSR1P21757 451 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 STOMP27105 288 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 CAV3P56539 151 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 RNF151Q2KHN1 245 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 TERB2Q8NHR7 220 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 COQ8AQ8NI60 647 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 RNF133Q8WVZ7 376 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 UPRTQ96BW1 309 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 FBXL3Q9UKT7 428 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 LHFPL6Q9Y693 200 aa9.07□□□□□ -0.96
HERC4-207ENST00000460168 ANKRD11Q6UB99 2663 aaPredicted RBP9.06□□□□□ -0.96
HERC4-207ENST00000460168 IGKV3D-15A0A087WSY6 115 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 A0A087WV48 116 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 SHISA3A0PJX4 238 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 C7orf66A4D0T2 115 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 IFITM10A6NMD0 228 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 TGOLN2O43493 480 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 CSF3P09919 207 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 CPN1P15169 458 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 GZMHP20718 246 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 OTX1P32242 354 aaPredicted RBP9.06□□□□□ -0.96
HERC4-207ENST00000460168 MTNR1BP49286 362 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 ZNF133P52736 654 aaPredicted RBP9.06□□□□□ -0.96
HERC4-207ENST00000460168 RPS11P62280 158 aaKnown RBP eCLIP9.06□□□□□ -0.96
HERC4-207ENST00000460168 WDR38Q5JTN6 314 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 SLC22A25Q6T423 547 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 TUSC5Q8IXB3 177 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 OR5M8Q8NGP6 311 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 CCDC107Q8WV48 283 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 CACNG8Q8WXS5 425 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 ZCCHC14Q8WYQ9 949 aaKnown RBP9.06□□□□□ -0.96
HERC4-207ENST00000460168 MALSU1Q96EH3 234 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 WDYHV1Q96HA8 205 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 C4orf45Q96LM5 186 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 SLC25A32Q9H2D1 315 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 CALHM2Q9HA72 323 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 DNAJC4Q9NNZ3 241 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 PGPEP1Q9NXJ5 209 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 EMC9Q9Y3B6 208 aa9.06□□□□□ -0.96
HERC4-207ENST00000460168 TMEM269A0A1B0GVZ9 245 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 OR4C45A6NMZ5 311 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 ZNF878C9JN71 531 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 F5H0A9 414 aaPredicted RBP9.05□□□□□ -0.96
HERC4-207ENST00000460168 H3BSH0 61 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 RER1O15258 196 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 NCR1O76036 304 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 IGHG3P01860 377 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 MAS1LP35410 378 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 MFGE8Q08431 387 aaPredicted RBP9.05□□□□□ -0.96
HERC4-207ENST00000460168 RNPS1Q15287 305 aaKnown RBP9.05□□□□□ -0.96
HERC4-207ENST00000460168 TAF13Q15543 124 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 KCTD9Q7L273 389 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 OR5M9Q8NGP3 310 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 OR13D1Q8NGV5 346 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 FAM222BQ8WU58 562 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 TMEM45BQ96B21 275 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 ZNF837Q96EG3 531 aaPredicted RBP9.05□□□□□ -0.96
HERC4-207ENST00000460168 PSG11Q9UQ72 335 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 IQCMA0A1B0GVH7 501 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 INMT-MINDY4F8WBC2 141 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 IGHV3-9P01782 118 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 MT-ND4LP03901 98 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 CCL2P13500 99 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 OR2B8PP59922 312 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 RPL19P84098 196 aaKnown RBP9.05□□□□□ -0.96
HERC4-207ENST00000460168 HLXQ14774 488 aaPredicted RBP9.05□□□□□ -0.96
HERC4-207ENST00000460168 Q499Y3 187 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 PRAMEF5Q5TYX0 476 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 PRAMEF6Q5VXH4 476 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 NCR3LG1Q68D85 454 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 C5orf24Q7Z6I8 188 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 OR11H7Q8NGC8 314 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 GPR148Q8TDV2 347 aa9.05□□□□□ -0.96
HERC4-207ENST00000460168 RGP1Q92546 391 aaPredicted RBP9.05□□□□□ -0.96
HERC4-207ENST00000460168 SLCO5A1Q9H2Y9 848 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms