RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 JAGN1Q8N5M9 183 aa13.04□□□□□ -0.32
SDF4-204ENST00000459994 PNLDC1Q8NA58 520 aaKnown RBP13.04□□□□□ -0.32
SDF4-204ENST00000459994 ZSCAN4Q8NAM6 433 aaPredicted RBP13.04□□□□□ -0.32
SDF4-204ENST00000459994 SCCPDHQ8NBX0 429 aa13.04□□□□□ -0.32
SDF4-204ENST00000459994 NDNFQ8TB73 568 aa13.04□□□□□ -0.32
SDF4-204ENST00000459994 Q8TCH9 128 aa13.04□□□□□ -0.32
SDF4-204ENST00000459994 FAHD2AQ96GK7 314 aa13.04□□□□□ -0.32
SDF4-204ENST00000459994 GPER1Q99527 375 aa13.04□□□□□ -0.32
SDF4-204ENST00000459994 TMPRSS13Q9BYE2 586 aa13.04□□□□□ -0.32
SDF4-204ENST00000459994 FN3KRPQ9HA64 309 aa13.04□□□□□ -0.32
SDF4-204ENST00000459994 ISPDA4D126 451 aa13.03□□□□□ -0.32
SDF4-204ENST00000459994 IFITM5A6NNB3 132 aa13.03□□□□□ -0.32
SDF4-204ENST00000459994 IFNL4K9M1U5 179 aa13.03□□□□□ -0.32
SDF4-204ENST00000459994 SLC17A2O00624 439 aa13.03□□□□□ -0.32
SDF4-204ENST00000459994 VENTXO95231 258 aa13.03□□□□□ -0.32
SDF4-204ENST00000459994 IGHV2-70P01814 119 aa13.03□□□□□ -0.32
SDF4-204ENST00000459994 ACAA1P09110 424 aaPredicted RBP13.03□□□□□ -0.32
SDF4-204ENST00000459994 ZFP36P26651 326 aaKnown RBP13.03□□□□□ -0.32
SDF4-204ENST00000459994 PTGFRP43088 359 aa13.03□□□□□ -0.32
SDF4-204ENST00000459994 OR10A3P58181 314 aa13.03□□□□□ -0.32
SDF4-204ENST00000459994 SEC61A1P61619 476 aaKnown RBP13.03□□□□□ -0.32
SDF4-204ENST00000459994 IL24Q13007 206 aa13.03□□□□□ -0.32
SDF4-204ENST00000459994 MPPED2Q15777 294 aa13.03□□□□□ -0.32
SDF4-204ENST00000459994 HAGHLQ6PII5 290 aaPredicted RBP13.03□□□□□ -0.32
SDF4-204ENST00000459994 ANGPTL5Q86XS5 388 aa13.03□□□□□ -0.32
SDF4-204ENST00000459994 CALHM1Q8IU99 346 aa13.03□□□□□ -0.32
SDF4-204ENST00000459994 PXT1Q8NFP0 134 aa13.03□□□□□ -0.32
SDF4-204ENST00000459994 OR6M1Q8NGM8 313 aa13.03□□□□□ -0.32
SDF4-204ENST00000459994 OR10Z1Q8NGY1 313 aa13.03□□□□□ -0.32
SDF4-204ENST00000459994 AQP3Q92482 292 aa13.03□□□□□ -0.32
SDF4-204ENST00000459994 RFT1Q96AA3 541 aa13.03□□□□□ -0.32
SDF4-204ENST00000459994 SLC25A46Q96AG3 418 aa13.03□□□□□ -0.32
SDF4-204ENST00000459994 CNTD2Q9H8S5 307 aa13.03□□□□□ -0.32
SDF4-204ENST00000459994 POLDIP2Q9Y2S7 368 aa13.03□□□□□ -0.32
SDF4-204ENST00000459994 TRAV20A0A0B4J274 112 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 IGHV3-64DA0A0J9YX35 117 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 A6NLC8 198 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 AIPO00170 330 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 CDIPTO14735 213 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 TMEM225BP0DP42 221 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 HTR2CP28335 458 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 POU3F4P49335 361 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 LCN2P80188 198 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 ZNF181Q2M3W8 571 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 SFXN4Q6P4A7 337 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 MOGAT3Q86VF5 341 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 MKXQ8IYA7 352 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 ZNF671Q8TAW3 534 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 TNFAIP8L1Q8WVP5 186 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 RAB1CQ92928 201 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 SLC25A28Q96A46 364 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 GAL3ST1Q99999 423 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 PLGRKTQ9HBL7 147 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 GCM1Q9NP62 436 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 TMEM106BQ9NUM4 274 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 GHRLQ9UBU3 117 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 PPP1R3CQ9UQK1 317 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 NPTNQ9Y639 398 aa13.02□□□□□ -0.33
SDF4-204ENST00000459994 TCF21O43680 179 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 SYNGR1O43759 233 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 NOS1APO75052 506 aaPredicted RBP13.01□□□□□ -0.33
SDF4-204ENST00000459994 CYB5AP00167 134 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 UBBP0CG47 229 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 PMELP40967 661 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 OR3A4PP47883 348 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 RORCP51449 518 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 CAPZA1P52907 286 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 CAV3P56539 151 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 HOXA4Q00056 320 aaPredicted RBP13.01□□□□□ -0.33
SDF4-204ENST00000459994 RAB11BQ15907 218 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 WDR82Q6UXN9 313 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 SLC25A26Q70HW3 274 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.01□□□□□ -0.33
SDF4-204ENST00000459994 OR4D6Q8NGJ1 314 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 OR5D18Q8NGL1 313 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 OR11L1Q8NGX0 322 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 DYNC2LI1Q8TCX1 351 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 RAB39BQ96DA2 213 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 TIMD4Q96H15 378 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 OCEL1Q9H607 264 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 RHOFQ9HBH0 211 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 UFSP2Q9NUQ7 469 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 C1orf123Q9NWV4 160 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 IL36GQ9NZH8 169 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 STEAP1Q9UHE8 339 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 METRNQ9UJH8 293 aa13.01□□□□□ -0.33
SDF4-204ENST00000459994 MRPS28Q9Y2Q9 187 aaKnown RBP13.01□□□□□ -0.33
SDF4-204ENST00000459994 SMIM30A4D0T7 59 aa13□□□□□ -0.33
SDF4-204ENST00000459994 SPRY1O43609 319 aaPredicted RBP13□□□□□ -0.33
SDF4-204ENST00000459994 ZNF205O95201 554 aa13□□□□□ -0.33
SDF4-204ENST00000459994 ZMYND11Q15326 602 aa13□□□□□ -0.33
SDF4-204ENST00000459994 HES5Q5TA89 166 aa13□□□□□ -0.33
SDF4-204ENST00000459994 ZNF826PQ6ZT77 177 aa13□□□□□ -0.33
SDF4-204ENST00000459994 C1QL2Q7Z5L3 287 aa13□□□□□ -0.33
SDF4-204ENST00000459994 TBC1D15Q8TC07 691 aa13□□□□□ -0.33
SDF4-204ENST00000459994 KCTD12Q96CX2 325 aaKnown RBP13□□□□□ -0.33
SDF4-204ENST00000459994 C1orf147Q96MC9 270 aaPredicted RBP13□□□□□ -0.33
SDF4-204ENST00000459994 S100A13Q99584 98 aa13□□□□□ -0.33
SDF4-204ENST00000459994 NKX3-1Q99801 234 aaPredicted RBP13□□□□□ -0.33
SDF4-204ENST00000459994 MRI1Q9BV20 369 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms