RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 FOPNLQ96NB1 174 aa3.18□□□□□ -1.9
HMGB3P30-201ENST00000457863 VPS25Q9BRG1 176 aa3.18□□□□□ -1.9
HMGB3P30-201ENST00000457863 MARVELD1Q9BSK0 173 aa3.18□□□□□ -1.9
HMGB3P30-201ENST00000457863 EMC6Q9BV81 110 aa3.18□□□□□ -1.9
HMGB3P30-201ENST00000457863 TAS2R5Q9NYW4 299 aa3.18□□□□□ -1.9
HMGB3P30-201ENST00000457863 OR12D3Q9UGF7 316 aa3.18□□□□□ -1.9
HMGB3P30-201ENST00000457863 SLC2A6Q9UGQ3 507 aa3.18□□□□□ -1.9
HMGB3P30-201ENST00000457863 PSG8Q9UQ74 426 aa3.18□□□□□ -1.9
HMGB3P30-201ENST00000457863 ZNF257Q9Y2Q1 563 aa3.18□□□□□ -1.9
HMGB3P30-201ENST00000457863 UBIAD1Q9Y5Z9 338 aa3.18□□□□□ -1.9
HMGB3P30-201ENST00000457863 RLFQ13129 1914 aa3.18□□□□□ -1.9
HMGB3P30-201ENST00000457863 NAV1Q8NEY1 1877 aa3.18□□□□□ -1.9
HMGB3P30-201ENST00000457863 CKAP5Q14008 2032 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 TRBV5-4A0A0C4DH59 114 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 A0A0G2JLM5 398 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 A0A1B0GVG6 124 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 LINC01553A4QN01 128 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 BTNL10A8MVZ5 291 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 TRAPPC2LH3BP13 241 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 MFSD11O43934 449 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 CRLF1O75462 422 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 SLC35G6P0C7Q6 338 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 OR56A5P0C7T3 313 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 GKN3PP0CG01 181 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 CD79AP11912 226 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 PAX6P26367 422 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 CD34P28906 385 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 PFN2P35080 140 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 CD200P41217 278 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 REG1BP48304 166 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 RFX2P48378 723 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 SERPINB10P48595 397 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 RND2P52198 227 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 CRYBA2P53672 197 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 CKS1BP61024 79 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 TAB1Q15750 504 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 HENMT1Q5T8I9 393 aaKnown RBP3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 OTUD1Q5VV17 481 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 LEMD1Q68G75 181 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 ZNF324BQ6AW86 544 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 REP15Q6BDI9 236 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 LAMTOR1Q6IAA8 161 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 MRPL55Q7Z7F7 128 aaKnown RBP3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 CARM1Q86X55 608 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 HOGA1Q86XE5 327 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 ZNF567Q8N184 647 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 SLC35F6Q8N357 371 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 FTMTQ8N4E7 242 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 COX18Q8N8Q8 333 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 SMRP1Q8NCR6 262 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 PRSS33Q8NF86 280 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 OR4P4Q8NGL7 312 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 RFESDQ8TAC1 157 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 NT5CQ8TCD5 201 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 BLNKQ8WV28 456 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 TMED6Q8WW62 240 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 DIRAS2Q96HU8 199 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 CDX2Q99626 313 aaPredicted RBP3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 MEIS3Q99687 375 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 PITX2Q99697 317 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 SULT4A1Q9BR01 284 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 CCDC32Q9BV29 185 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 CHST5Q9GZS9 411 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 WDR13Q9H1Z4 485 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 ZDHHC11Q9H8X9 412 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 EXOSC3Q9NQT5 275 aaKnown RBP3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 ZNF224Q9NZL3 707 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 VAX2Q9UIW0 290 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 PYCARDQ9ULZ3 195 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 ASTN1O14525 1302 aa3.17□□□□□ -1.9
HMGB3P30-201ENST00000457863 GRIN2BQ13224 1484 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 MAP1LC3B2A6NCE7 125 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 TRABD2BA6NFA1 517 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 ZNF726A6NNF4 738 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 FAAHO00519 579 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 SLC22A1O15245 554 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 HMGB3O15347 200 aaKnown RBP3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 CYB5BO43169 146 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 EDIL3O43854 480 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 CCDC22O60826 627 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 NPIPB7O75200 414 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 SCRG1O75711 98 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 UPK1BO75841 260 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 IFNA4P05014 189 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 S100A8P05109 93 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 ALPLP05186 524 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 FCGR3AP08637 254 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 OR5G3P0C626 314 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 CD37P11049 281 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 GABRA1P14867 456 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 LIFP15018 202 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 ZNF708P17019 499 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 GGT1P19440 569 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 RAB3AP20336 220 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 PSMB9P28065 219 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 MIPP30301 263 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 FCGR2CP31995 323 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 CEACAM8P31997 349 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 MYCNOSP40205 109 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 PPICP45877 212 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms