RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 A0A1B0GUS0 222 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 A0A1B0GWJ7 208 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 FAM230AA0A1W2PPH8 454 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 C3orf80F5H4A9 247 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 KCNAB3O43448 404 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 CYB5R3P00387 301 aaPredicted RBP11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 MAS1P04201 325 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 CLEC2LP0C7M8 214 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 IGHV4-38-2P0DP08 117 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 FSTP19883 344 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 AZGP1P25311 298 aaKnown RBP11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 CALRP27797 417 aaKnown RBP11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 GATA4P43694 442 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 GPM6AP51674 278 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 MAB21L1Q13394 359 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 ZNF404Q494X3 552 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 ZNF529Q6P280 563 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 CRIP3Q6Q6R5 217 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 TREML4Q6UXN2 200 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 KRT74Q7RTS7 529 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 LRRTM1Q86UE6 522 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 MOGAT3Q86VF5 341 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 ANKRD13BQ86YJ7 626 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 SERPINA12Q8IW75 414 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 OR52N4Q8NGI2 321 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 OR8S1Q8NH09 359 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 DACT3Q96B18 629 aaPredicted RBP11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 C10orf35Q96D05 121 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 RNF170Q96K19 258 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 GFI1Q99684 422 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 PRDM13Q9H4Q3 707 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 MMP24Q9Y5R2 645 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 MPC1Q9Y5U8 109 aa11.42□□□□□ -0.58
PDLIM2-213ENST00000448520 DPPA5A6NC42 116 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 ZNF732B4DXR9 585 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 SULT1B1O43704 296 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 GABARAPO95166 117 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 ZNF205O95201 554 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 GRPP07492 148 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 RAB3AP20336 220 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 MAPK3P27361 379 aaPredicted RBP11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 FGF9P31371 208 aaPredicted RBP11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 PITPNBP48739 271 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 OR10A3P58181 314 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 VBP1P61758 197 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 HOXA4Q00056 320 aaPredicted RBP11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 MPPED2Q15777 294 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 KCNJ8Q15842 424 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 CTF1Q16619 201 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 DCDC5Q6ZRR9 648 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 UTS2BQ765I0 119 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 OR5D14Q8NGL3 314 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 OR11L1Q8NGX0 322 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 PP6455Q8WZ26 134 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 ZDHHC16Q969W1 377 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 NUDT16L1Q9BRJ7 211 aaKnown RBP11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 SLC22A4Q9H015 551 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 CLN8Q9UBY8 286 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 NOP16Q9Y3C1 178 aaKnown RBP11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 AK6Q9Y3D8 172 aaKnown RBP11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 CEPT1Q9Y6K0 416 aa11.41□□□□□ -0.58
PDLIM2-213ENST00000448520 WNK1Q9H4A3 2382 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 PQLC2LA1A4F0 135 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 ANXA2P2A6NMY6 339 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 CRYBA1P05813 215 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 LIPFP07098 398 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 HCKP08631 526 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 SRMP19623 302 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 GALP22466 123 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 PMELP40967 661 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 NPY4RP50391 375 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 CAV3P56539 151 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 PPP3R1P63098 170 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 MXD1Q05195 221 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 CEACAM21Q3KPI0 293 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 DDI2Q5TDH0 399 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 GPR157Q5UAW9 335 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 WDR25Q64LD2 544 aaPredicted RBP11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 ZNF826PQ6ZT77 177 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 NR2C2APQ86WQ0 139 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 ANGPTL5Q86XS5 388 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 BATF2Q8N1L9 274 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 FTMTQ8N4E7 242 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 OR5D18Q8NGL1 313 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 Q8TCH9 128 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 MICU1Q9BPX6 476 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 RTL8AQ9BWD3 113 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 RBM38Q9H0Z9 239 aaKnown RBP11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 TCF7L1Q9HCS4 588 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 UFSP2Q9NUQ7 469 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 FOXJ3Q9UPW0 622 aa11.4□□□□□ -0.58
PDLIM2-213ENST00000448520 IGHV3OR16-10A0A075B7F0 116 aa11.39□□□□□ -0.59
PDLIM2-213ENST00000448520 TRAV40A0A0B4J280 105 aa11.39□□□□□ -0.59
PDLIM2-213ENST00000448520 ENSAO43768 121 aaKnown RBP11.39□□□□□ -0.59
PDLIM2-213ENST00000448520 ARL6IP5O75915 188 aa11.39□□□□□ -0.59
PDLIM2-213ENST00000448520 OCMP0CE72 109 aaPredicted RBP11.39□□□□□ -0.59
PDLIM2-213ENST00000448520 BDKRB2P30411 391 aa11.39□□□□□ -0.59
PDLIM2-213ENST00000448520 SDC2P34741 201 aa11.39□□□□□ -0.59
PDLIM2-213ENST00000448520 CD200P41217 278 aa11.39□□□□□ -0.59
PDLIM2-213ENST00000448520 CNN3Q15417 329 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms