RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 DNAJC27Q9NZQ0 273 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 SIGLEC7Q9Y286 467 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 ORC6Q9Y5N6 252 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 SZT2Q5T011 3432 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 OVOS2A0A0G2JMS6 1433 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 OVOS2A0A0J9YW53 1432 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 HFM1A2PYH4 1435 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 OVOS2Q6IE36 1432 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 DUOX2Q9NRD8 1548 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 COL6A3P12111 3177 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 PTPN23Q9H3S7 1636 aa3.08□□□□□ -1.92
HMGB1P48-201ENST00000446155 TRAV8-6A0A0B4J262 113 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 MYL12BO14950 172 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 UBDO15205 165 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 TCAPO15273 167 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 SLC31A1O15431 190 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 FGF16O43320 207 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 ATP8B1O43520 1251 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 TRAF3IP2O43734 574 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 TRBV12-3P01733 135 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 PVALBP20472 110 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 COILP38432 576 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 CTRLP40313 264 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 NMUP48645 174 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 STC1P52823 247 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 RAB8AP61006 207 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 COQ5Q5HYK3 327 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 AVPI1Q5T686 147 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 HHATQ5VTY9 493 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 RSBN1Q5VWQ0 802 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 TMEM236Q5W0B7 351 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 KDM4DQ6B0I6 523 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 ZNF544Q6NX49 715 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 TMEM156Q8N614 296 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 TMEM251Q8N6I4 163 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 ACBD4Q8NC06 268 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 OR5L1Q8NGL2 311 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 OR10G4Q8NGN3 311 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 OR6N1Q8NGY5 312 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 PIFOQ8TCI5 191 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 RXFP4Q8TDU9 374 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 C17orf50Q8WW18 174 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 CPNE4Q96A23 557 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 PPWD1Q96BP3 646 aaKnown RBP3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 CMTM5Q96DZ9 223 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 SMARCD1Q96GM5 515 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 APOL4Q9BPW4 351 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 EMC6Q9BV81 110 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 TMED9Q9BVK6 235 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 PARD6GQ9BYG4 376 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 SLC25A39Q9BZJ4 359 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 NSRP1Q9H0G5 558 aaKnown RBP3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 LRRC19Q9H756 370 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 PSTPIP2Q9H939 334 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 HEBP1Q9NRV9 189 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 IL17CQ9P0M4 197 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 ASTN1O14525 1302 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 BCL9O00512 1426 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 CEP162Q5TB80 1403 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 EIF2AK4Q9P2K8 1649 aaKnown RBP3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 CEP152O94986 1710 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 LRRIQ1Q96JM4 1722 aa3.07□□□□□ -1.92
HMGB1P48-201ENST00000446155 A0A1W2PRG6 482 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 FTCDNL1E5RQL4 147 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 DNASE2O00115 360 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 PSPHP1O15172 72 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 CYTH3O43739 400 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 CD5LO43866 347 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 PSMG1O95456 288 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 SLC25A27O95847 323 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 OCM2P0CE71 109 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 TCN2P20062 427 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 MAGP20916 626 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 SSTR5P35346 364 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 CXCL5P42830 114 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 PPOXP50336 477 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 MAGOHP61326 146 aaKnown RBP3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 RPL23P62829 140 aaKnown RBP3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 IFITM3Q01628 133 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 LAMTOR4Q0VGL1 99 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 NAIPQ13075 1403 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 SHHQ15465 462 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 RSPO1Q2MKA7 263 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 CEACAM16Q2WEN9 425 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 SLC36A2Q495M3 483 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 TMEM255AQ5JRV8 349 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 FAM45BPQ6NSW5 357 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 MED27Q6P2C8 311 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 CEMP1Q6PRD7 247 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 DRAM2Q6UX65 266 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 USP50Q70EL3 339 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 PGAM4Q8N0Y7 254 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 DCAF4L2Q8NA75 395 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 ZNF461Q8TAF7 563 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 ACTL9Q8TC94 416 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 FAM45AQ8TCE6 357 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 ABHD3Q8WU67 409 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 NELFBQ8WX92 580 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 YIPF6Q96EC8 236 aa3.06□□□□□ -1.92
HMGB1P48-201ENST00000446155 MRAP2Q96G30 205 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms