RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 UBA52P62987 128 aaKnown RBP8.63□□□□□ -1.03
MCF2L-216ENST00000439475 NCR3LG1Q68D85 454 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 METAP1DQ6UB28 335 aaPredicted RBP8.63□□□□□ -1.03
MCF2L-216ENST00000439475 BRD3OSQ6XYD6 125 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 VMO1Q7Z5L0 202 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 FAM185AQ8N0U4 392 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 BATF2Q8N1L9 274 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 FGFRL1Q8N441 504 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 STX19Q8N4C7 294 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 OR13C9Q8NGT0 318 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 GPR148Q8TDV2 347 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 EMG1Q92979 244 aaKnown RBP8.63□□□□□ -1.03
MCF2L-216ENST00000439475 SLAMF9Q96A28 289 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 SNX22Q96L94 193 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 VCX3BQ9H321 246 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 SEBOXQ9HB31 216 aaPredicted RBP8.63□□□□□ -1.03
MCF2L-216ENST00000439475 RHOFQ9HBH0 211 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 MTCH1Q9NZJ7 389 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 CNOT2Q9NZN8 540 aaKnown RBP8.63□□□□□ -1.03
MCF2L-216ENST00000439475 SF3B6Q9Y3B4 125 aaKnown RBP8.63□□□□□ -1.03
MCF2L-216ENST00000439475 FAM96BQ9Y3D0 163 aa8.63□□□□□ -1.03
MCF2L-216ENST00000439475 IGKV1-27A0A075B6S5 117 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 IGKV1-9A0A0C4DH69 117 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 TMEM89A2RUT3 159 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 E9PI62 339 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 H0YJX3 145 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 CLDN34H7C241 214 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 SULT1B1O43704 296 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 FCN3O75636 299 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 TK1P04183 234 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 CRYBA1P05813 215 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 PIPP12273 146 aaPredicted RBP8.62□□□□□ -1.03
MCF2L-216ENST00000439475 RAB3AP20336 220 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 ETV1P50549 477 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 GTF2A1P52655 376 aaPredicted RBP8.62□□□□□ -1.03
MCF2L-216ENST00000439475 RPL31P62899 125 aaKnown RBP8.62□□□□□ -1.03
MCF2L-216ENST00000439475 ST3GAL4Q11206 333 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 FOXL1Q12952 345 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 PDZK1IP1Q13113 114 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 CDK5R1Q15078 307 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 TUSC1Q2TAM9 212 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 DEFB112Q30KQ8 113 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 GDPD3Q7L5L3 318 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 FAM58AQ8N1B3 248 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 PARP16Q8N5Y8 322 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 CD177Q8N6Q3 437 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 ASCC1Q8N9N2 400 aaKnown RBP8.62□□□□□ -1.03
MCF2L-216ENST00000439475 BPIFB6Q8NFQ5 453 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 OR51A4Q8NGJ6 313 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 OR10AC1Q8NH08 325 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 OR52N1Q8NH53 320 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 GGHQ92820 318 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 ZNF48Q96MX3 618 aaPredicted RBP8.62□□□□□ -1.03
MCF2L-216ENST00000439475 GPER1Q99527 375 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 PDCD1LG2Q9BQ51 273 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 PRDM13Q9H4Q3 707 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 METTL8Q9H825 291 aaKnown RBP8.62□□□□□ -1.03
MCF2L-216ENST00000439475 HEXA-AS1Q9H8Q6 139 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 PLCXD1Q9NUJ7 323 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 SCN3BQ9NY72 215 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 ZNF281Q9Y2X9 895 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 NF1P21359 2839 aa8.62□□□□□ -1.03
MCF2L-216ENST00000439475 FUOMA2VDF0 154 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 ERICH4A6NGS2 130 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 DNAJC9-AS1A6NH13 148 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 K7N7A8 449 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 SH2D1BO14796 132 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 MYL12BO14950 172 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 OGG1O15527 345 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 TFF1P04155 84 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 RNASE1P07998 156 aaKnown RBP8.61□□□□□ -1.03
MCF2L-216ENST00000439475 TMEM225BP0DP42 221 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 SOX2P48431 317 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 CEBPDP49716 269 aaPredicted RBP8.61□□□□□ -1.03
MCF2L-216ENST00000439475 BMXP51813 675 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 TAS2R43P59537 309 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 COL10A1Q03692 680 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 SPIN3Q5JUX0 258 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 OR2G6Q5TZ20 316 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 RUSC1-AS1Q66K80 236 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 C16orf87Q6PH81 154 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 Q6YL49 198 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 SAXO1Q8IYX7 474 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 TMEM86BQ8N661 226 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 TFAP2CQ92754 450 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 ESM1Q9NQ30 184 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 SIRT7Q9NRC8 400 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 ERGIC3Q9Y282 383 aa8.61□□□□□ -1.03
MCF2L-216ENST00000439475 BTBD17A6NE02 478 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 HAX1O00165 279 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 SPRY1O43609 319 aaPredicted RBP8.6□□□□□ -1.03
MCF2L-216ENST00000439475 HAND1O96004 215 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 FBP1P09467 338 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 HKR1P10072 659 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 PRKACAP17612 351 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 BCL3P20749 454 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 UBE2E1P51965 193 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 EDDM3BP56851 147 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 ERVFRD-1P60508 538 aa8.6□□□□□ -1.03
MCF2L-216ENST00000439475 PPP3R1P63098 170 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms