RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 CRIP3Q6Q6R5 217 aa11.21□□□□□ -0.61
SNX3-204ENST00000426155 C9orf139Q6ZV77 190 aa11.21□□□□□ -0.61
SNX3-204ENST00000426155 Q8N7P7 452 aa11.21□□□□□ -0.61
SNX3-204ENST00000426155 OR5D18Q8NGL1 313 aa11.21□□□□□ -0.61
SNX3-204ENST00000426155 OR5AK2Q8NH90 309 aa11.21□□□□□ -0.61
SNX3-204ENST00000426155 TSEN15Q8WW01 171 aaKnown RBP11.21□□□□□ -0.61
SNX3-204ENST00000426155 TAF15Q92804 592 aaKnown RBP eCLIP11.21□□□□□ -0.61
SNX3-204ENST00000426155 GGHQ92820 318 aa11.21□□□□□ -0.61
SNX3-204ENST00000426155 C10orf35Q96D05 121 aa11.21□□□□□ -0.61
SNX3-204ENST00000426155 CEP19Q96LK0 163 aa11.21□□□□□ -0.61
SNX3-204ENST00000426155 C19orf12Q9NSK7 152 aa11.21□□□□□ -0.61
SNX3-204ENST00000426155 DIMT1Q9UNQ2 313 aaKnown RBP11.21□□□□□ -0.61
SNX3-204ENST00000426155 TRBV2A0A0J9YWF9 115 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 A0A1W2PQ09 198 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 MEX3AA1L020 520 aaKnown RBP11.2□□□□□ -0.62
SNX3-204ENST00000426155 TMEM212A6NML5 194 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 ANGPTL7O43827 346 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 CCDC159P0C7I6 412 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 BCL3P20749 454 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 DCKP27707 260 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 SOX2P48431 317 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 RBP2P50120 134 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 ATP1B3P54709 279 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 AQP4P55087 323 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 SNU13P55769 128 aaKnown RBP11.2□□□□□ -0.62
SNX3-204ENST00000426155 MTCP1P56278 107 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 CAV3P56539 151 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 ACTG1P63261 375 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 BAMBIQ13145 260 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 IL18R1Q13478 541 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 CDK5R1Q15078 307 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 ASPHD2Q6ICH7 369 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 RBMS3Q6XE24 437 aaKnown RBP11.2□□□□□ -0.62
SNX3-204ENST00000426155 UTS2BQ765I0 119 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 FAM185AQ8N0U4 392 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 ZFP41Q8N8Y5 198 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 OR13C5Q8NGS8 318 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 C8orf46Q8TAG6 207 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 EMG1Q92979 244 aaKnown RBP11.2□□□□□ -0.62
SNX3-204ENST00000426155 OPALINQ96PE5 141 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 JMJD8Q96S16 334 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 NKX3-1Q99801 234 aaPredicted RBP11.2□□□□□ -0.62
SNX3-204ENST00000426155 COMMD4Q9H0A8 199 aa11.2□□□□□ -0.62
SNX3-204ENST00000426155 RBFOX1Q9NWB1 397 aaKnown RBP11.2□□□□□ -0.62
SNX3-204ENST00000426155 IGHV1-69DA0A0B4J2H0 117 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 IGKV1-12A0A0C4DH73 117 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 A0A1W2PRD5 423 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 A0A1W2PRF3 423 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 A0A1W2PRM7 423 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 H0YAE9 185 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 TRIM77I1YAP6 450 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 SLC1A7O00341 560 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 IGKV1D-12P01611 117 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 IGHV1-69P01742 117 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 MYL12AP19105 171 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 DUSP1P28562 367 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 COL10A1Q03692 680 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 ST3GAL4Q11206 333 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 AHSA2Q719I0 299 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 PNKDQ8N490 385 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 ASCC1Q8N9N2 400 aaKnown RBP11.19□□□□□ -0.62
SNX3-204ENST00000426155 DNAAF1Q8NEP3 725 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 BPIFB6Q8NFQ5 453 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 OR4M1Q8NGD0 313 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 FBLIM1Q8WUP2 373 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 GATAD2BQ8WXI9 593 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 TFAP2CQ92754 450 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 SPSB1Q96BD6 273 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 ORAI1Q96D31 301 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 TMEM80Q96HE8 168 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 ZCCHC4Q9H5U6 513 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 TNFRSF19Q9NS68 423 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 DHDHQ9UQ10 334 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 CAB39Q9Y376 341 aaPredicted RBP11.19□□□□□ -0.62
SNX3-204ENST00000426155 EXOSC1Q9Y3B2 195 aaKnown RBP11.19□□□□□ -0.62
SNX3-204ENST00000426155 KPTNQ9Y664 436 aa11.19□□□□□ -0.62
SNX3-204ENST00000426155 A0A0U1RQK1 487 aa11.18□□□□□ -0.62
SNX3-204ENST00000426155 IRGMA1A4Y4 181 aa11.18□□□□□ -0.62
SNX3-204ENST00000426155 RNASEK-C17orf49H0YIS7 233 aa11.18□□□□□ -0.62
SNX3-204ENST00000426155 KNG1P01042 644 aa11.18□□□□□ -0.62
SNX3-204ENST00000426155 OCM2P0CE71 109 aa11.18□□□□□ -0.62
SNX3-204ENST00000426155 OCMP0CE72 109 aaPredicted RBP11.18□□□□□ -0.62
SNX3-204ENST00000426155 PIPP12273 146 aaPredicted RBP11.18□□□□□ -0.62
SNX3-204ENST00000426155 PRKACBP22694 351 aa11.18□□□□□ -0.62
SNX3-204ENST00000426155 ERVFRD-1P60508 538 aa11.18□□□□□ -0.62
SNX3-204ENST00000426155 MRPL28Q13084 256 aaKnown RBP11.18□□□□□ -0.62
SNX3-204ENST00000426155 PDCD1Q15116 288 aa11.18□□□□□ -0.62
SNX3-204ENST00000426155 SLC9A3R2Q15599 337 aa11.18□□□□□ -0.62
SNX3-204ENST00000426155 TMPRSS11AQ6ZMR5 421 aa11.18□□□□□ -0.62
SNX3-204ENST00000426155 LHFPL2Q6ZUX7 228 aa11.18□□□□□ -0.62
SNX3-204ENST00000426155 EGFL6Q8IUX8 553 aa11.18□□□□□ -0.62
SNX3-204ENST00000426155 ZNF561Q8N587 486 aa11.18□□□□□ -0.62
SNX3-204ENST00000426155 KIR3DL3Q8N743 410 aa11.18□□□□□ -0.62
SNX3-204ENST00000426155 OR51A2Q8NGJ7 313 aa11.18□□□□□ -0.62
SNX3-204ENST00000426155 RPS4Y2Q8TD47 263 aa11.18□□□□□ -0.62
SNX3-204ENST00000426155 FAM216AQ8WUB2 273 aa11.18□□□□□ -0.62
SNX3-204ENST00000426155 ETAA1Q9NY74 926 aa11.18□□□□□ -0.62
SNX3-204ENST00000426155 TAS2R4Q9NYW5 299 aa11.18□□□□□ -0.62
SNX3-204ENST00000426155 HSPE1-MOB4S4R3N1 261 aa11.18□□□□□ -0.62
SNX3-204ENST00000426155 PNMA8CA0A1B0GUJ8 204 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms