RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 DUX4Q9UBX2 424 aa20.38■□□□□ 0.85
VEGFA-209ENST00000425836 ZNF222Q9UK12 451 aa20.38■□□□□ 0.85
VEGFA-209ENST00000425836 MEGF11A6BM72 1044 aa20.38■□□□□ 0.85
VEGFA-209ENST00000425836 PHF1O43189 567 aaPredicted RBP20.38■□□□□ 0.85
VEGFA-209ENST00000425836 ARL6IP5O75915 188 aa20.38■□□□□ 0.85
VEGFA-209ENST00000425836 KNG1P01042 644 aa20.38■□□□□ 0.85
VEGFA-209ENST00000425836 SFTPBP07988 381 aa20.38■□□□□ 0.85
VEGFA-209ENST00000425836 LCN2P80188 198 aa20.38■□□□□ 0.85
VEGFA-209ENST00000425836 ASCL4Q6XD76 172 aa20.38■□□□□ 0.85
VEGFA-209ENST00000425836 CDH26Q8IXH8 852 aa20.38■□□□□ 0.85
VEGFA-209ENST00000425836 FAM216BQ8N7L0 139 aa20.38■□□□□ 0.85
VEGFA-209ENST00000425836 EMG1Q92979 244 aaKnown RBP20.38■□□□□ 0.85
VEGFA-209ENST00000425836 SSBP3Q9BWW4 388 aaPredicted RBP20.38■□□□□ 0.85
VEGFA-209ENST00000425836 MED13LQ71F56 2210 aa20.37■□□□□ 0.85
VEGFA-209ENST00000425836 ZANQ9Y493 2812 aa20.37■□□□□ 0.85
VEGFA-209ENST00000425836 KIAA1324LA8MWY0 1029 aaPredicted RBP20.37■□□□□ 0.85
VEGFA-209ENST00000425836 FOXH1O75593 365 aa20.37■□□□□ 0.85
VEGFA-209ENST00000425836 FCN3O75636 299 aa20.37■□□□□ 0.85
VEGFA-209ENST00000425836 SMIM18P0DKX4 95 aa20.37■□□□□ 0.85
VEGFA-209ENST00000425836 CALCBP10092 127 aa20.37■□□□□ 0.85
VEGFA-209ENST00000425836 GALP22466 123 aa20.37■□□□□ 0.85
VEGFA-209ENST00000425836 GABRA2P47869 451 aa20.37■□□□□ 0.85
VEGFA-209ENST00000425836 WDR25Q64LD2 544 aaPredicted RBP20.37■□□□□ 0.85
VEGFA-209ENST00000425836 Q71RC1 249 aaPredicted RBP20.37■□□□□ 0.85
VEGFA-209ENST00000425836 SLC36A1Q7Z2H8 476 aa20.37■□□□□ 0.85
VEGFA-209ENST00000425836 FAM58AQ8N1B3 248 aa20.37■□□□□ 0.85
VEGFA-209ENST00000425836 JAGN1Q8N5M9 183 aa20.37■□□□□ 0.85
VEGFA-209ENST00000425836 CD177Q8N6Q3 437 aa20.37■□□□□ 0.85
VEGFA-209ENST00000425836 NKAIN3Q8N8D7 197 aa20.37■□□□□ 0.85
VEGFA-209ENST00000425836 GAFA1Q96PS6 74 aa20.37■□□□□ 0.85
VEGFA-209ENST00000425836 FAM192AQ9GZU8 254 aa20.37■□□□□ 0.85
VEGFA-209ENST00000425836 CLN8Q9UBY8 286 aa20.37■□□□□ 0.85
VEGFA-209ENST00000425836 A8MXK9 166 aa20.36■□□□□ 0.85
VEGFA-209ENST00000425836 JUNBP17275 347 aaPredicted RBP20.36■□□□□ 0.85
VEGFA-209ENST00000425836 CALRP27797 417 aaKnown RBP20.36■□□□□ 0.85
VEGFA-209ENST00000425836 PRDX2P32119 198 aa20.36■□□□□ 0.85
VEGFA-209ENST00000425836 GNB2P62879 340 aa20.36■□□□□ 0.85
VEGFA-209ENST00000425836 PNLDC1Q8NA58 520 aaKnown RBP20.36■□□□□ 0.85
VEGFA-209ENST00000425836 SLITRK2Q9H156 845 aa20.36■□□□□ 0.85
VEGFA-209ENST00000425836 CNTD2Q9H8S5 307 aa20.36■□□□□ 0.85
VEGFA-209ENST00000425836 RHOFQ9HBH0 211 aa20.36■□□□□ 0.85
VEGFA-209ENST00000425836 HMG20AQ9NP66 347 aa20.36■□□□□ 0.85
VEGFA-209ENST00000425836 IL36RNQ9UBH0 155 aa20.36■□□□□ 0.85
VEGFA-209ENST00000425836 CSPG4Q6UVK1 2322 aa20.35■□□□□ 0.85
VEGFA-209ENST00000425836 NKX6-3A6NJ46 265 aa20.35■□□□□ 0.85
VEGFA-209ENST00000425836 DVL1O14640 695 aa20.35■□□□□ 0.85
VEGFA-209ENST00000425836 SELLP14151 372 aa20.35■□□□□ 0.85
VEGFA-209ENST00000425836 CEBPDP49716 269 aaPredicted RBP20.35■□□□□ 0.85
VEGFA-209ENST00000425836 FAM166AQ6J272 317 aa20.35■□□□□ 0.85
VEGFA-209ENST00000425836 SDSLQ96GA7 329 aa20.35■□□□□ 0.85
VEGFA-209ENST00000425836 MED30Q96HR3 178 aa20.35■□□□□ 0.85
VEGFA-209ENST00000425836 YAE1D1Q9NRH1 226 aa20.35■□□□□ 0.85
VEGFA-209ENST00000425836 HIF1ANQ9NWT6 349 aa20.35■□□□□ 0.85
VEGFA-209ENST00000425836 OR14J1Q9UGF5 321 aa20.35■□□□□ 0.85
VEGFA-209ENST00000425836 POLR3KQ9Y2Y1 108 aaPredicted RBP20.35■□□□□ 0.85
VEGFA-209ENST00000425836 MAB21L2Q9Y586 359 aa20.35■□□□□ 0.85
VEGFA-209ENST00000425836 SIGLEC5O15389 551 aa20.34■□□□□ 0.85
VEGFA-209ENST00000425836 CDRT1O95170 752 aa20.34■□□□□ 0.85
VEGFA-209ENST00000425836 PRKACAP17612 351 aa20.34■□□□□ 0.85
VEGFA-209ENST00000425836 NPY4RP50391 375 aa20.34■□□□□ 0.85
VEGFA-209ENST00000425836 DVL1P1P54792 670 aaPredicted RBP20.34■□□□□ 0.85
VEGFA-209ENST00000425836 IL13RA1P78552 427 aa20.34■□□□□ 0.85
VEGFA-209ENST00000425836 IKZF1Q13422 519 aa20.34■□□□□ 0.85
VEGFA-209ENST00000425836 DGUOKQ16854 277 aa20.34■□□□□ 0.85
VEGFA-209ENST00000425836 TMEM186Q96B77 213 aa20.34■□□□□ 0.85
VEGFA-209ENST00000425836 ELL3Q9HB65 397 aaPredicted RBP20.34■□□□□ 0.85
VEGFA-209ENST00000425836 METRNQ9UJH8 293 aa20.34■□□□□ 0.85
VEGFA-209ENST00000425836 STUB1Q9UNE7 303 aa20.34■□□□□ 0.85
VEGFA-209ENST00000425836 ING4Q9UNL4 249 aa20.34■□□□□ 0.85
VEGFA-209ENST00000425836 TRAV20A0A0B4J274 112 aa20.34■□□□□ 0.85
VEGFA-209ENST00000425836 CD36P16671 472 aa20.34■□□□□ 0.85
VEGFA-209ENST00000425836 ELP2Q6IA86 826 aa20.34■□□□□ 0.85
VEGFA-209ENST00000425836 GLCCI1Q86VQ1 547 aa20.34■□□□□ 0.85
VEGFA-209ENST00000425836 LURAP1LQ8IV03 231 aa20.34■□□□□ 0.85
VEGFA-209ENST00000425836 FGFRL1Q8N441 504 aa20.34■□□□□ 0.85
VEGFA-209ENST00000425836 UQCC2Q9BRT2 126 aa20.34■□□□□ 0.85
VEGFA-209ENST00000425836 OR51E2Q9H255 320 aa20.34■□□□□ 0.85
VEGFA-209ENST00000425836 YLPM1P49750 1951 aaKnown RBP20.33■□□□□ 0.85
VEGFA-209ENST00000425836 NDUFB3O43676 98 aa20.33■□□□□ 0.84
VEGFA-209ENST00000425836 CD37P11049 281 aa20.33■□□□□ 0.84
VEGFA-209ENST00000425836 FGF9P31371 208 aaPredicted RBP20.33■□□□□ 0.84
VEGFA-209ENST00000425836 ZNF146Q15072 292 aa20.33■□□□□ 0.84
VEGFA-209ENST00000425836 RSU1Q15404 277 aa20.33■□□□□ 0.84
VEGFA-209ENST00000425836 GLT8D1Q68CQ7 371 aa20.33■□□□□ 0.84
VEGFA-209ENST00000425836 C22orf42Q6IC83 251 aa20.33■□□□□ 0.84
VEGFA-209ENST00000425836 ZNRF1Q8ND25 227 aa20.33■□□□□ 0.84
VEGFA-209ENST00000425836 Q8NFD4 153 aa20.33■□□□□ 0.84
VEGFA-209ENST00000425836 OR4D6Q8NGJ1 314 aa20.33■□□□□ 0.84
VEGFA-209ENST00000425836 OR10K1Q8NGX5 313 aa20.33■□□□□ 0.84
VEGFA-209ENST00000425836 GFI1Q99684 422 aa20.33■□□□□ 0.84
VEGFA-209ENST00000425836 METTL9Q9H1A3 318 aa20.33■□□□□ 0.84
VEGFA-209ENST00000425836 EXOSC4Q9NPD3 245 aaKnown RBP20.33■□□□□ 0.84
VEGFA-209ENST00000425836 MMP26Q9NRE1 261 aa20.33■□□□□ 0.84
VEGFA-209ENST00000425836 ABCA1O95477 2261 aa20.33■□□□□ 0.84
VEGFA-209ENST00000425836 DUSP1P28562 367 aa20.32■□□□□ 0.84
VEGFA-209ENST00000425836 MTNR1BP49286 362 aa20.32■□□□□ 0.84
VEGFA-209ENST00000425836 SNU13P55769 128 aaKnown RBP20.32■□□□□ 0.84
VEGFA-209ENST00000425836 FIP1L1Q6UN15 594 aaKnown RBP20.32■□□□□ 0.84
VEGFA-209ENST00000425836 FOXRED1Q96CU9 486 aaPredicted RBP20.32■□□□□ 0.84
VEGFA-209ENST00000425836 S100A13Q99584 98 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms