RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 DUX4L3P0CJ86 424 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 DUX4L4P0CJ87 422 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 DUX4L5P0CJ88 424 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 DUX4L6P0CJ89 424 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 DUX4L7P0CJ90 424 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 PSG2P11465 335 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 RPS2P15880 293 aaKnown RBP7.73□□□□□ -1.17
PDGFC-202ENST00000422544 CD36P16671 472 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 JUNBP17275 347 aaPredicted RBP7.73□□□□□ -1.17
PDGFC-202ENST00000422544 ADRA2CP18825 462 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 ZFP36P26651 326 aaKnown RBP7.73□□□□□ -1.17
PDGFC-202ENST00000422544 CALRP27797 417 aaKnown RBP7.73□□□□□ -1.17
PDGFC-202ENST00000422544 PTGFRP43088 359 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 GABRA2P47869 451 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 GZMKP49863 264 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 KRTAP1-1Q07627 177 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 STUMQ69YW2 141 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 CYB5R2Q6BCY4 276 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 CD200R1LQ6Q8B3 271 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 DUX4L9Q6RFH8 374 aaPredicted RBP7.73□□□□□ -1.17
PDGFC-202ENST00000422544 SAXO1Q8IYX7 474 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 JAGN1Q8N5M9 183 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 LINC01356Q8N9X3 169 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 ZSCAN4Q8NAM6 433 aaPredicted RBP7.73□□□□□ -1.17
PDGFC-202ENST00000422544 OR8B3Q8NGG8 313 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 ANGPTL6Q8NI99 470 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 PHYHIPQ92561 330 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 EMG1Q92979 244 aaKnown RBP7.73□□□□□ -1.17
PDGFC-202ENST00000422544 NEIL1Q96FI4 390 aaPredicted RBP7.73□□□□□ -1.17
PDGFC-202ENST00000422544 CPNE2Q96FN4 548 aaPredicted RBP7.73□□□□□ -1.17
PDGFC-202ENST00000422544 C1orf159Q96HA4 380 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 OR8B2Q96RD0 313 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 FAM192AQ9GZU8 254 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 OR51E2Q9H255 320 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 CNTD2Q9H8S5 307 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 ELL3Q9HB65 397 aaPredicted RBP7.73□□□□□ -1.17
PDGFC-202ENST00000422544 HES4Q9HCC6 221 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 SMURF1Q9HCE7 757 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 EXOSC4Q9NPD3 245 aaKnown RBP7.73□□□□□ -1.17
PDGFC-202ENST00000422544 RBFOX1Q9NWB1 397 aaKnown RBP7.73□□□□□ -1.17
PDGFC-202ENST00000422544 CTSZQ9UBR2 303 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 DUX4Q9UBX2 424 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 ING4Q9UNL4 249 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 ABCA1O95477 2261 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 MEGF11A6BM72 1044 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 B4DSR2 109 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 PHF1O43189 567 aaPredicted RBP7.72□□□□□ -1.17
PDGFC-202ENST00000422544 KDM4BO94953 1096 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 CDRT1O95170 752 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 TGFAP01135 160 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 GALP22466 123 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 GADD45AP24522 165 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 DUSP1P28562 367 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 PRDX2P32119 198 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 PITPNBP48739 271 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 CEBPDP49716 269 aaPredicted RBP7.72□□□□□ -1.17
PDGFC-202ENST00000422544 SNU13P55769 128 aaKnown RBP7.72□□□□□ -1.17
PDGFC-202ENST00000422544 LCN2P80188 198 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 IKZF1Q13422 519 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 SMIM21Q3B7S5 101 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 ATPAF1Q5TC12 328 aaPredicted RBP7.72□□□□□ -1.17
PDGFC-202ENST00000422544 C22orf42Q6IC83 251 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 CLEC9AQ6UXN8 241 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 ASCL4Q6XD76 172 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 ZNF841Q6ZN19 808 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 Q71RC1 249 aaPredicted RBP7.72□□□□□ -1.17
PDGFC-202ENST00000422544 NLRC3Q7RTR2 1065 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 BIVMQ86UB2 503 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 LYPD6Q86Y78 171 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 CDH26Q8IXH8 852 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 Q8IYB0 196 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 FAM58AQ8N1B3 248 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 CD177Q8N6Q3 437 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 FAM216BQ8N7L0 139 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 PNLDC1Q8NA58 520 aaKnown RBP7.72□□□□□ -1.17
PDGFC-202ENST00000422544 PXT1Q8NFP0 134 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 OR10K1Q8NGX5 313 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 SLITRK2Q9H156 845 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 TXNL4BQ9NX01 149 aaKnown RBP7.72□□□□□ -1.17
PDGFC-202ENST00000422544 IL36RNQ9UBH0 155 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 OR14J1Q9UGF5 321 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 STUB1Q9UNE7 303 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 SSR3Q9UNL2 185 aa7.72□□□□□ -1.17
PDGFC-202ENST00000422544 AK6Q9Y3D8 172 aaKnown RBP7.72□□□□□ -1.17
PDGFC-202ENST00000422544 TANC2Q9HCD6 1990 aa7.71□□□□□ -1.17
PDGFC-202ENST00000422544 SVEP1Q4LDE5 3571 aa7.71□□□□□ -1.17
PDGFC-202ENST00000422544 LOC100506127A0A0U1RQW1 187 aa7.71□□□□□ -1.18
PDGFC-202ENST00000422544 SHISA3A0PJX4 238 aa7.71□□□□□ -1.18
PDGFC-202ENST00000422544 NKX6-3A6NJ46 265 aa7.71□□□□□ -1.18
PDGFC-202ENST00000422544 DVL1O14640 695 aa7.71□□□□□ -1.18
PDGFC-202ENST00000422544 CD5LO43866 347 aa7.71□□□□□ -1.18
PDGFC-202ENST00000422544 FOXH1O75593 365 aa7.71□□□□□ -1.18
PDGFC-202ENST00000422544 FCN3O75636 299 aa7.71□□□□□ -1.18
PDGFC-202ENST00000422544 HTR3BO95264 441 aa7.71□□□□□ -1.18
PDGFC-202ENST00000422544 KNG1P01042 644 aa7.71□□□□□ -1.18
PDGFC-202ENST00000422544 MSMBP08118 114 aa7.71□□□□□ -1.18
PDGFC-202ENST00000422544 SELLP14151 372 aa7.71□□□□□ -1.18
PDGFC-202ENST00000422544 ZNF16P17020 682 aaPredicted RBP7.71□□□□□ -1.18
PDGFC-202ENST00000422544 PRKACAP17612 351 aa7.71□□□□□ -1.18
PDGFC-202ENST00000422544 CPT2P23786 658 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms