RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 CD34P28906 385 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 CMPK1P30085 196 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 PRSS3P35030 304 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 DLSTP36957 453 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 RPL35P42766 123 aaKnown RBP2.17□□□□□ -2.06
VPS41-206ENST00000418457 CX3CR1P49238 355 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 RGS19P49795 217 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 PRKXP51817 358 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 ZNF136P52737 540 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 SLC25A1P53007 311 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 HSD17B7P56937 341 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 H2BFSP57053 126 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 FXYD6P3P58550 94 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 ST8SIA6P61647 398 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 RPS15AP62244 130 aaKnown RBP2.17□□□□□ -2.06
VPS41-206ENST00000418457 RPS11P62280 158 aaKnown RBP eCLIP2.17□□□□□ -2.06
VPS41-206ENST00000418457 POLR2GP62487 172 aaKnown RBP eCLIP2.17□□□□□ -2.06
VPS41-206ENST00000418457 PPIAP62937 165 aaKnown RBP2.17□□□□□ -2.06
VPS41-206ENST00000418457 ERVK-25P63136 954 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 CSNK1G2P78368 415 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 TNFRSF17Q02223 184 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 PRDX1Q06830 199 aaKnown RBP2.17□□□□□ -2.06
VPS41-206ENST00000418457 PJVKQ0ZLH3 352 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 ENPP2Q13822 863 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 KIAA0141Q14154 515 aaPredicted RBP2.17□□□□□ -2.06
VPS41-206ENST00000418457 LY6DQ14210 128 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 PEA15Q15121 130 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 OR1Q1Q15612 314 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 LPAL2Q16609 132 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 SNAI3Q3KNW1 292 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 TMEM52BQ4KMG9 183 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 FAM74A3Q4VXF1 159 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 TP53I3Q53FA7 332 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 TMEM255AQ5JRV8 349 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 TEX30Q5JUR7 227 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 DNLZQ5SXM8 178 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 DCST2Q5T1A1 773 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 FAM27D1Q5T7N8 215 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 HES5Q5TA89 166 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 RAB12Q6IQ22 244 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 H3F3CQ6NXT2 135 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 STEAP1BQ6NZ63 245 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 TMEM205Q6UW68 189 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 NHLRC1Q6VVB1 395 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 STAC2Q6ZMT1 411 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 DPY19L2P2Q6ZN68 376 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 ZNF836Q6ZNA1 936 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 RFLNAQ6ZTI6 216 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 Q71RC1 249 aaPredicted RBP2.17□□□□□ -2.06
VPS41-206ENST00000418457 ZNF550Q7Z398 422 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 OR2W3Q7Z3T1 314 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 TMEM150AQ86TG1 271 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 COMTD1Q86VU5 262 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 PARGQ86W56 976 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 VRK2Q86Y07 508 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 LRRC25Q8N386 305 aaPredicted RBP2.17□□□□□ -2.06
VPS41-206ENST00000418457 GTPBP8Q8N3Z3 284 aaPredicted RBP2.17□□□□□ -2.06
VPS41-206ENST00000418457 COMMD1Q8N668 190 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 ZNF433Q8N7K0 673 aaPredicted RBP2.17□□□□□ -2.06
VPS41-206ENST00000418457 ZDHHC22Q8N966 263 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 ACOT4Q8N9L9 421 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 CDRT4Q8N9R6 151 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 MFSD9Q8NBP5 474 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 ZNF740Q8NDX6 193 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 SLC30A7Q8NEW0 376 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 BPIFCQ8NFQ6 507 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 STEAP2Q8NFT2 490 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 OR4D9Q8NGE8 314 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 OR5M1Q8NGP8 315 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 OR13C5Q8NGS8 318 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 OR13C2Q8NGS9 318 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 OR2L8Q8NGY9 312 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 OR5AK2Q8NH90 309 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 NT5CQ8TCD5 201 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 GPX8Q8TED1 209 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 SFT2D1Q8WV19 159 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 PCNPQ8WW12 178 aaKnown RBP2.17□□□□□ -2.06
VPS41-206ENST00000418457 TCTEX1D2Q8WW35 142 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 TFGQ92734 400 aaPredicted RBP2.17□□□□□ -2.06
VPS41-206ENST00000418457 RAB7BQ96AH8 199 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 SNRNP40Q96DI7 357 aaKnown RBP2.17□□□□□ -2.06
VPS41-206ENST00000418457 MS4A6EQ96DS6 147 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 CAPNS2Q96L46 248 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 ZNF681Q96N22 645 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 DERL3Q96Q80 235 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 GAL3ST4Q96RP7 486 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 RASL10BQ96S79 203 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 GPX7Q96SL4 187 aaPredicted RBP2.17□□□□□ -2.06
VPS41-206ENST00000418457 PHB2Q99623 299 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 PRRT1Q99946 306 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 PRSS27Q9BQR3 290 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 WFDC6Q9BQY6 131 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 ZNF426Q9BUY5 554 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 ZNF471Q9BX82 626 aaPredicted RBP2.17□□□□□ -2.06
VPS41-206ENST00000418457 C1QTNF6Q9BXI9 259 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 NMNAT2Q9BZQ4 307 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 NMES1Q9C002 83 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 OR2AG1Q9H205 316 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 OR51V1Q9H2C8 321 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 MTIF3Q9H2K0 278 aaKnown RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms