RNA–Protein interactions for RNA: ENST00000410569.1

RNU4-25P-201, Transcript of RNA, U4 small nuclear 25, pseudogene, humanhuman

BASIC

Gene RNU4-25P, Length 230 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-25P-201ENST00000410569 PTBP3O95758 552 aaKnown RBP3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 PAHP00439 452 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 ACSM4P0C7M7 580 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 ATP6V1B1P15313 513 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 HOXD3P31249 432 aaPredicted RBP3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 DCTDP32321 178 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 PYCR1P32322 319 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 NAA10P41227 235 aaPredicted RBP3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 CX3CR1P49238 355 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 BMXP51813 675 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 RIDAP52758 137 aaKnown RBP3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 CRISP1P54107 249 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 ACTC1P68032 377 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 ACTA1P68133 377 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 CDK5Q00535 292 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 TMED1Q13445 227 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 MED21Q13503 144 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 MEP1BQ16820 701 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 PCK2Q16822 640 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 TMEM95Q3KNT9 176 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 DEFB121Q5J5C9 76 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 WDR38Q5JTN6 314 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 MEDAGQ5VYS4 303 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 NXNL2Q5VZ03 156 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 HCP5Q6MZN7 132 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 PLBD1Q6P4A8 553 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 CORO6Q6QEF8 472 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 CFAP77Q6ZQR2 320 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 COLCA1Q6ZS62 124 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 SLC16A9Q7RTY1 509 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 WDR86Q86TI4 376 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 COMMD2Q86X83 199 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 FAM216BQ8N7L0 139 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 CCDC54Q8NEL0 328 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 OR4F17Q8NGA8 305 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 OTOSQ8NHW6 89 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 HAVCR2Q8TDQ0 301 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 NPRL2Q8WTW4 380 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 THEM6Q8WUY1 208 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 RNF133Q8WVZ7 376 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 TRUB1Q8WWH5 349 aaKnown RBP3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 SLCO4A1Q96BD0 722 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 SEH1LQ96EE3 360 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 DUS3LQ96G46 650 aaKnown RBP3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 CENPNQ96H22 339 aaPredicted RBP3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 Q96MT0 163 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 OR4F4Q96R69 305 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 CNN2Q99439 309 aaKnown RBP3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 NKX3-1Q99801 234 aaPredicted RBP3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 SSX3Q99909 188 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 MICU1Q9BPX6 476 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 C9orf16Q9BUW7 83 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 RTL8AQ9BWD3 113 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 NMNAT2Q9BZQ4 307 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 YIPF3Q9GZM5 350 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 GABARAPL1Q9H0R8 117 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 C8orf4Q9NR00 106 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 TVP23BQ9NYZ1 205 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 RNF7Q9UBF6 113 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 KAAG1Q9UBP8 84 aa3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 WARS2Q9UGM6 360 aaKnown RBP3.61□□□□□ -1.83
RNU4-25P-201ENST00000410569 A0A1W2PPH5 198 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 hCG_1807616A0A1W2PRN6 198 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 IRGMA1A4Y4 181 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 TVP23AA6NH52 213 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 FAM183AA6NL82 134 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 A6NLC8 198 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 TMEM210A6NLX4 147 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 DCTN6O00399 190 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 PROP1O75360 226 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 ECDO95905 644 aaPredicted RBP3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 TFF1P04155 84 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 KRT8P05787 483 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 GYPBP06028 91 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 OCM2P0CE71 109 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 OCMP0CE72 109 aaPredicted RBP3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 CA6P23280 308 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 EEF1B2P24534 225 aaKnown RBP3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 OTX1P32242 354 aaPredicted RBP3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 PRKXP51817 358 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 ACTA2P62736 377 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 ACTG2P63267 376 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 EMX1Q04741 257 aaPredicted RBP3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 ACSM1Q08AH1 577 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 EGFEM1PQ0D2K5 195 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 PPP1R8Q12972 351 aaKnown RBP3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 MRPL28Q13084 256 aaKnown RBP3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 APOFQ13790 326 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 GK2Q14410 553 aaPredicted RBP3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 PTGES3Q15185 160 aaKnown RBP3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 RSPO1Q2MKA7 263 aaPredicted RBP3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 LRRC75BQ2VPJ9 315 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 KRTAP27-1Q3LI81 207 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 TEX36Q5VZQ5 186 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 FAHD1Q6P587 224 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 KCTD8Q6ZWB6 473 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 MEPCEQ7L2J0 689 aaKnown RBP3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 DPY19L4Q7Z388 723 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 CPOQ8IVL8 374 aa3.6□□□□□ -1.83
RNU4-25P-201ENST00000410569 TIGD4Q8IY51 512 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms