RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 GATCO43716 136 aaKnown RBP7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 OR3A4PP47883 348 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 KLF3P57682 345 aaPredicted RBP7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 MS4A18Q3C1V0 323 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 UBAC2Q8NBM4 344 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 OR2Z1Q8NG97 314 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 PERPQ96FX8 193 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 SPACA5Q96QH8 159 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 CNTD2Q9H8S5 307 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 SLC6A13Q9NSD5 602 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 A0A1B0GTL3 188 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 FAM221AA4D161 298 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 HSBP1O75506 76 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 PI3P19957 117 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 RPS4Y1P22090 263 aaKnown RBP7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 G0S2P27469 103 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 PAX5Q02548 391 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 INPP5JQ15735 1006 aaPredicted RBP7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 PDZD11Q5EBL8 140 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 PTP4A1Q93096 173 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 GSX1Q9H4S2 264 aaPredicted RBP7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 RBFOX3A6NFN3 312 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 C21orf140B9A014 251 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 ZFPL1O95159 310 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 VAMP3Q15836 100 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 RHBDD2Q6NTF9 364 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 TMEM108Q6UXF1 575 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 OR10G4Q8NGN3 311 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 OR10G9Q8NGN4 311 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 OR10G7Q8NGN6 311 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 OR5C1Q8NGR4 320 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 PARP11Q9NR21 331 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 C20orf141Q9NUB4 165 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 ONECUT1Q9UBC0 465 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 MMP24Q9Y5R2 645 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 RBBP6Q7Z6E9 1792 aaKnown RBP7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 THSD7AQ9UPZ6 1657 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 M0R143 59 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 PNPP00491 289 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 OPRK1P41145 380 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 HYAL1Q12794 435 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 HFEQ30201 348 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 STUMQ69YW2 141 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 CLEC9AQ6UXN8 241 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 BHLHA15Q7RTS1 189 aaPredicted RBP7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 LRRTM1Q86UE6 522 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 RPEQ96AT9 228 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 ACY3Q96HD9 319 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 NXF2Q9GZY0 626 aaKnown RBP7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 ARRDC1-AS1Q9H2J1 176 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 ZNF768Q9H5H4 540 aaKnown RBP7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 NEU3Q9UQ49 428 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 OR2T8A6NH00 312 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 STAG3L2P0CL84 134 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 EPHA8P29322 1005 aaPredicted RBP7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 RAC3P60763 192 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 GABRA6Q16445 453 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 SIGIRRQ6IA17 410 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 SLC25A40Q8TBP6 338 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 A0A1B0GU03 582 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 LINC00862A6NCI5 91 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 K7ESF4 209 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 ONECUT2O95948 504 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 USF1P22415 310 aaPredicted RBP7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 ZP4Q12836 540 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 LINC01555Q8NAE3 123 aa7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 COL5A3P25940 1745 aaPredicted RBP7.42□□□□□ -1.22
SPTLC3-201ENST00000399002 TRAV38-1A0A0B4J264 116 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 LIPT2A6NK58 231 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 PITX3O75364 302 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 MT-CO3P00414 261 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 C1QAP02745 245 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 NGFRP08138 427 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 MPGP29372 298 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 AVPR2P30518 371 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 CDKN2AP42771 156 aaKnown RBP7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 SMAGPQ0VAQ4 97 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 RAB32Q13637 225 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 PABPC1L2AQ5JQF8 200 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 OR4A4PQ8NGN8 299 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 OR10D3Q8NH80 312 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 FAM210BQ96KR6 192 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 RAB1BQ9H0U4 201 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 OR2D2Q9H210 308 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 WDR54Q9H977 334 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 MRM2Q9UI43 246 aaKnown RBP7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 PCDHGA9Q9Y5G4 932 aaKnown RBP7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 TMEM11P17152 192 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 SULT1A2P50226 295 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 HTRA3P83110 453 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 TNFAIP6P98066 277 aaPredicted RBP7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 PMP22Q01453 160 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 FZD5Q13467 585 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 STXBP6Q8NFX7 210 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 ALKBH3Q96Q83 286 aaPredicted RBP7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 VPS25Q9BRG1 176 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 PRNDQ9UKY0 176 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 PCOLCE2Q9UKZ9 415 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 MASP2O00187 686 aa7.41□□□□□ -1.22
SPTLC3-201ENST00000399002 SPRY3O43610 288 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms