RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 C20orf24Q9BUV8 137 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 UCK1Q9HA47 277 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 BCO1Q9HAY6 547 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 LAMA5O15230 3695 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 DCHS1Q96JQ0 3298 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF814B7Z6K7 855 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 M0R135 149 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 LAMTOR5O43504 91 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 HPNP05981 417 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 OR13C7P0DN81 318 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 CAV2P51636 162 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 Q7L0L9 218 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 CBLN2Q8IUK8 224 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF695Q8IW36 515 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 OR4B1Q8NGF8 309 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 OR5M9Q8NGP3 310 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 LILRB1Q8NHL6 650 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-202ENST00000398417 RPS4Y2Q8TD47 263 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 EDAQ92838 391 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF799Q96GE5 643 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 FOXB1Q99853 325 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 RGCCQ9H4X1 137 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF319Q9P2F9 582 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 MYOTQ9UBF9 498 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 COL4A4P53420 1690 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-202ENST00000398417 MSGN1A6NI15 193 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 K7EPK0 472 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 DNASE2O00115 360 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-202ENST00000398417 HSPB6O14558 160 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 SYNGR4O95473 234 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 CRHP06850 196 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 GSTP1P09211 210 aaKnown RBP4.34□□□□□ -1.71
SMAD4-202ENST00000398417 PGA4P0DJD7 388 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 PGA3P0DJD8 388 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 IRF2P14316 349 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 B4GALT1P15291 398 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 GUCA2BQ16661 112 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF774Q6NX45 483 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 THNSL2Q86YJ6 484 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 PAQR4Q8N4S7 273 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-202ENST00000398417 FAM71E2Q8N5Q1 922 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 AQP3Q92482 292 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 NINJ1Q92982 152 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 SIT1Q9Y3P8 196 aa4.34□□□□□ -1.71
SMAD4-202ENST00000398417 ZNF646O15015 1829 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-202ENST00000398417 PARP14Q460N5 1801 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 ARGFXA6NJG6 315 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 TMEM14DPA8MWL7 114 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 RPL12P30050 165 aaKnown RBP4.34□□□□□ -1.72
SMAD4-202ENST00000398417 DEGS2Q6QHC5 323 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 PLXDC2Q6UX71 529 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 APCDD1LQ8NCL9 501 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 OR52H1Q8NGJ2 320 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 OR5B3Q8NH48 314 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 OR10C1Q96KK4 312 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 BPTFQ12830 3046 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 IGHV3-64DA0A0J9YX35 117 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 PHF1O43189 567 aaPredicted RBP4.34□□□□□ -1.72
SMAD4-202ENST00000398417 FGF2P09038 288 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 PAX6P26367 422 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 ADH6P28332 368 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 MPGP29372 298 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 NDUFA6P56556 154 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 DHODHQ02127 395 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 PJVKQ0ZLH3 352 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF273Q14593 569 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 KISS1Q15726 138 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 TMEM164Q5U3C3 297 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 TMEM268Q5VZI3 342 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 C1QL2Q7Z5L3 287 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 SUMF1Q8NBK3 374 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 GJC3Q8NFK1 279 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 OR10S1Q8NGN2 331 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 LHFPL5Q8TAF8 219 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 HLA-CQ95604 372 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 SPACA9Q96E40 222 aaPredicted RBP4.34□□□□□ -1.72
SMAD4-202ENST00000398417 RASL10BQ96S79 203 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 SYT3Q9BQG1 590 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 REG4Q9BYZ8 158 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF286AQ9HBT8 521 aa4.34□□□□□ -1.72
SMAD4-202ENST00000398417 NOSIPQ9Y314 301 aaKnown RBP4.34□□□□□ -1.72
SMAD4-202ENST00000398417 LRP3O75074 770 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 HPP00738 406 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 SLC25A4P12235 298 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 S100A4P26447 101 aaKnown RBP4.33□□□□□ -1.72
SMAD4-202ENST00000398417 CYCSP99999 105 aaKnown RBP4.33□□□□□ -1.72
SMAD4-202ENST00000398417 CSRP2Q16527 193 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 JMJD6Q6NYC1 403 aaPredicted RBP4.33□□□□□ -1.72
SMAD4-202ENST00000398417 TMEM88Q6PEY1 159 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 OVCH2Q7RTZ1 564 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 SPEM1Q8N4L4 309 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 ZNF709Q8N972 641 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 OR6S1Q8NH40 331 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 SGK494Q96LW2 274 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 LHFPL6Q9Y693 200 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 A0A096LPE4 126 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 A0A1W2PPZ6 126 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 ONECUT2O95948 504 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 RAB9AP51151 201 aa4.33□□□□□ -1.72
SMAD4-202ENST00000398417 NOVA1P51513 510 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms