RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 KCNE4Q8WWG9 221 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 NECAB3Q96P71 396 aaPredicted RBP15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 RNF126Q9BV68 326 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 ZNF629Q9UEG4 869 aaPredicted RBP15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 PCDHB10Q9UN67 800 aa15.97■□□□□ 0.15
CHRFAM7A-202ENST00000397827 SERPINE3A8MV23 424 aa15.96■□□□□ 0.15
CHRFAM7A-202ENST00000397827 SERPINA5P05154 406 aa15.96■□□□□ 0.15
CHRFAM7A-202ENST00000397827 MUC1P15941 1255 aaPredicted RBP15.96■□□□□ 0.15
CHRFAM7A-202ENST00000397827 GDF1P27539 372 aa15.96■□□□□ 0.15
CHRFAM7A-202ENST00000397827 HTR5AP47898 357 aa15.96■□□□□ 0.15
CHRFAM7A-202ENST00000397827 PPT1P50897 306 aa15.96■□□□□ 0.15
CHRFAM7A-202ENST00000397827 TAS2R46P59540 309 aa15.96■□□□□ 0.15
CHRFAM7A-202ENST00000397827 CEACAM16Q2WEN9 425 aa15.96■□□□□ 0.15
CHRFAM7A-202ENST00000397827 SPINK14Q6IE38 97 aa15.96■□□□□ 0.15
CHRFAM7A-202ENST00000397827 RRNAD1Q96FB5 475 aaKnown RBP15.96■□□□□ 0.15
CHRFAM7A-202ENST00000397827 DMRT1Q9Y5R6 373 aa15.96■□□□□ 0.15
CHRFAM7A-202ENST00000397827 DHRS7CA6NNS2 312 aa15.96■□□□□ 0.15
CHRFAM7A-202ENST00000397827 B4E171 279 aa15.96■□□□□ 0.15
CHRFAM7A-202ENST00000397827 TSPAN7P41732 249 aa15.96■□□□□ 0.15
CHRFAM7A-202ENST00000397827 ZXDAP98168 799 aa15.96■□□□□ 0.15
CHRFAM7A-202ENST00000397827 PSG4Q00888 419 aa15.96■□□□□ 0.15
CHRFAM7A-202ENST00000397827 EIF3IQ13347 325 aaKnown RBP15.96■□□□□ 0.15
CHRFAM7A-202ENST00000397827 NMES1Q9C002 83 aa15.96■□□□□ 0.15
CHRFAM7A-202ENST00000397827 ASF1BQ9NVP2 202 aa15.96■□□□□ 0.15
CHRFAM7A-202ENST00000397827 P4HTMQ9NXG6 502 aa15.96■□□□□ 0.15
CHRFAM7A-202ENST00000397827 KNTC1P50748 2209 aa15.96■□□□□ 0.14
CHRFAM7A-202ENST00000397827 C1orf196B1AJZ1 125 aa15.95■□□□□ 0.14
CHRFAM7A-202ENST00000397827 DNPH1O43598 174 aa15.95■□□□□ 0.14
CHRFAM7A-202ENST00000397827 IGHEP01854 428 aa15.95■□□□□ 0.14
CHRFAM7A-202ENST00000397827 CST2P09228 141 aa15.95■□□□□ 0.14
CHRFAM7A-202ENST00000397827 RELQ04864 619 aaPredicted RBP15.95■□□□□ 0.14
CHRFAM7A-202ENST00000397827 C6orf15Q6UXA7 325 aaPredicted RBP15.95■□□□□ 0.14
CHRFAM7A-202ENST00000397827 C10orf35Q96D05 121 aa15.95■□□□□ 0.14
CHRFAM7A-202ENST00000397827 ADGRG7Q96K78 797 aa15.95■□□□□ 0.14
CHRFAM7A-202ENST00000397827 OR10C1Q96KK4 312 aa15.95■□□□□ 0.14
CHRFAM7A-202ENST00000397827 Q96M66 194 aa15.95■□□□□ 0.14
CHRFAM7A-202ENST00000397827 FOXB1Q99853 325 aa15.95■□□□□ 0.14
CHRFAM7A-202ENST00000397827 FREM1Q5H8C1 2179 aa15.95■□□□□ 0.14
CHRFAM7A-202ENST00000397827 A0A1W2PPE3 182 aa15.95■□□□□ 0.14
CHRFAM7A-202ENST00000397827 MSTNO14793 375 aa15.95■□□□□ 0.14
CHRFAM7A-202ENST00000397827 CLN5O75503 358 aa15.95■□□□□ 0.14
CHRFAM7A-202ENST00000397827 CYB561P49447 251 aa15.95■□□□□ 0.14
CHRFAM7A-202ENST00000397827 OR2V1Q8NHB1 315 aa15.95■□□□□ 0.14
CHRFAM7A-202ENST00000397827 FAAP24Q9BTP7 215 aa15.95■□□□□ 0.14
CHRFAM7A-202ENST00000397827 METTL8Q9H825 291 aaKnown RBP15.95■□□□□ 0.14
CHRFAM7A-202ENST00000397827 FIGNL2A6NMB9 653 aa15.94■□□□□ 0.14
CHRFAM7A-202ENST00000397827 ZNF205O95201 554 aa15.94■□□□□ 0.14
CHRFAM7A-202ENST00000397827 CSTBP04080 98 aaKnown RBP15.94■□□□□ 0.14
CHRFAM7A-202ENST00000397827 RRADP55042 308 aa15.94■□□□□ 0.14
CHRFAM7A-202ENST00000397827 PEA15Q15121 130 aa15.94■□□□□ 0.14
CHRFAM7A-202ENST00000397827 RSU1Q15404 277 aa15.94■□□□□ 0.14
CHRFAM7A-202ENST00000397827 BRICD5Q6PL45 260 aa15.94■□□□□ 0.14
CHRFAM7A-202ENST00000397827 SULF2Q8IWU5 870 aa15.94■□□□□ 0.14
CHRFAM7A-202ENST00000397827 ZSCAN4Q8NAM6 433 aaPredicted RBP15.94■□□□□ 0.14
CHRFAM7A-202ENST00000397827 CPT1CQ8TCG5 803 aa15.94■□□□□ 0.14
CHRFAM7A-202ENST00000397827 SCGB3A2Q96PL1 93 aa15.94■□□□□ 0.14
CHRFAM7A-202ENST00000397827 HOXB5P09067 269 aa15.94■□□□□ 0.14
CHRFAM7A-202ENST00000397827 ZNF44P15621 663 aa15.94■□□□□ 0.14
CHRFAM7A-202ENST00000397827 RPS2P15880 293 aaKnown RBP15.94■□□□□ 0.14
CHRFAM7A-202ENST00000397827 ACP1P24666 158 aa15.94■□□□□ 0.14
CHRFAM7A-202ENST00000397827 PSMF1Q92530 271 aa15.94■□□□□ 0.14
CHRFAM7A-202ENST00000397827 ACKR4Q9NPB9 350 aa15.94■□□□□ 0.14
CHRFAM7A-202ENST00000397827 COLCA2A8K830 154 aa15.93■□□□□ 0.14
CHRFAM7A-202ENST00000397827 ZNHIT1O43257 154 aa15.93■□□□□ 0.14
CHRFAM7A-202ENST00000397827 SFTPCP11686 197 aa15.93■□□□□ 0.14
CHRFAM7A-202ENST00000397827 SSPNQ14714 243 aa15.93■□□□□ 0.14
CHRFAM7A-202ENST00000397827 RPUSD3Q6P087 351 aaKnown RBP15.93■□□□□ 0.14
CHRFAM7A-202ENST00000397827 EMG1Q92979 244 aaKnown RBP15.93■□□□□ 0.14
CHRFAM7A-202ENST00000397827 RAB18Q9NP72 206 aa15.93■□□□□ 0.14
CHRFAM7A-202ENST00000397827 OR5AC2Q9NZP5 309 aa15.93■□□□□ 0.14
CHRFAM7A-202ENST00000397827 OR6C6A6NF89 314 aa15.93■□□□□ 0.14
CHRFAM7A-202ENST00000397827 MSGN1A6NI15 193 aa15.93■□□□□ 0.14
CHRFAM7A-202ENST00000397827 NDUFB7P17568 137 aa15.93■□□□□ 0.14
CHRFAM7A-202ENST00000397827 CYCSP99999 105 aaKnown RBP15.93■□□□□ 0.14
CHRFAM7A-202ENST00000397827 ABLIM2Q6H8Q1 611 aa15.93■□□□□ 0.14
CHRFAM7A-202ENST00000397827 DYRK2Q92630 601 aa15.93■□□□□ 0.14
CHRFAM7A-202ENST00000397827 SPSB1Q96BD6 273 aa15.93■□□□□ 0.14
CHRFAM7A-202ENST00000397827 RHOVQ96L33 236 aa15.93■□□□□ 0.14
CHRFAM7A-202ENST00000397827 ZNF2Q9BSG1 426 aaPredicted RBP15.93■□□□□ 0.14
CHRFAM7A-202ENST00000397827 METTL9Q9H1A3 318 aa15.93■□□□□ 0.14
CHRFAM7A-202ENST00000397827 A0A0B4J2A0 478 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 OPRM1P35372 400 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 EIF2S3P41091 472 aaKnown RBP15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 PPIAP62937 165 aaKnown RBP15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 SRSF3P84103 164 aaKnown RBP15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 PIK3IP1Q96FE7 263 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 BORCS8Q96FH0 119 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 TMEM68Q96MH6 324 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 WNT5BQ9H1J7 359 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 TREM2Q9NZC2 230 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 GSKIPQ9P0R6 139 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 SHPKQ9UHJ6 478 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 FAM186AA6NE01 2351 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 TERTO14746 1132 aaKnown RBP15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 SERPINA7P05543 415 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 ZNF92Q03936 586 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 SRYQ05066 204 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 DEFB123Q8N688 67 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 OR51F2Q8NH61 342 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 THOC3Q96J01 351 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms