RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 C14orf79Q96F83 325 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 GINS3Q9BRX5 216 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 NAA11Q9BSU3 229 aaPredicted RBP13.64□□□□□ -0.23
HOXA3-202ENST00000396352 KCNIP3Q9Y2W7 256 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 A0A0J9YW62 118 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 TNFSF11O14788 317 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 SGCEO43556 437 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 NME2P1O60361 137 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 SEC11BP0C7V7 166 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 Q6ZPA2 131 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 SLC2A9Q9NRM0 540 aa13.64□□□□□ -0.23
HOXA3-202ENST00000396352 GEMIN2O14893 280 aaKnown RBP13.63□□□□□ -0.23
HOXA3-202ENST00000396352 XRCC2O43543 280 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 TSPAN15O95858 294 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 CYC1P08574 325 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 EPHA8P29322 1005 aaPredicted RBP13.63□□□□□ -0.23
HOXA3-202ENST00000396352 FHITP49789 147 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 FXYD4P59646 89 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 ZNF774Q6NX45 483 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 OR52M1Q8NGK5 317 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 HIST1H2BAQ96A08 127 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 INTS12Q96CB8 462 aaKnown RBP13.63□□□□□ -0.23
HOXA3-202ENST00000396352 MSI2Q96DH6 328 aaKnown RBP13.63□□□□□ -0.23
HOXA3-202ENST00000396352 USB1Q9BQ65 265 aaKnown RBP13.63□□□□□ -0.23
HOXA3-202ENST00000396352 CCDC187A0A096LP49 1063 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 GPR137BO60478 399 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 LMO1P25800 156 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 NTF4P34130 210 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 P2RY1P47900 373 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 B2MP61769 119 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 CNN3Q15417 329 aaKnown RBP13.63□□□□□ -0.23
HOXA3-202ENST00000396352 ABCA11PQ4W5N1 156 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 PHLDA2Q53GA4 152 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 AKIRIN2Q53H80 203 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 LIAT1Q6ZQX7 453 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 SPEM1Q8N4L4 309 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 SUCNR1Q9BXA5 334 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 WDR54Q9H977 334 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 SH2D2AQ9NP31 389 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 FAM221AA4D161 298 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 EIF3GO75821 320 aaKnown RBP eCLIP13.63□□□□□ -0.23
HOXA3-202ENST00000396352 UMODP07911 640 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 HMGN3Q15651 99 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 TMEM42Q69YG0 159 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 SLC22A25Q6T423 547 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 GPR137CQ8N3F9 429 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 IMMP1LQ96LU5 166 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 SH3BGRL3Q9H299 93 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 DKKL1Q9UK85 242 aa13.63□□□□□ -0.23
HOXA3-202ENST00000396352 IGFBP4P22692 258 aa13.62□□□□□ -0.23
HOXA3-202ENST00000396352 RBP2P50120 134 aa13.62□□□□□ -0.23
HOXA3-202ENST00000396352 KRTAP27-1Q3LI81 207 aa13.62□□□□□ -0.23
HOXA3-202ENST00000396352 AWAT1Q58HT5 328 aa13.62□□□□□ -0.23
HOXA3-202ENST00000396352 OR5L1Q8NGL2 311 aa13.62□□□□□ -0.23
HOXA3-202ENST00000396352 GLI4P10075 376 aa13.62□□□□□ -0.23
HOXA3-202ENST00000396352 COX6A1P12074 109 aa13.62□□□□□ -0.23
HOXA3-202ENST00000396352 PTAFRP25105 342 aa13.62□□□□□ -0.23
HOXA3-202ENST00000396352 STARD6P59095 220 aa13.62□□□□□ -0.23
HOXA3-202ENST00000396352 ZNF616Q08AN1 781 aa13.62□□□□□ -0.23
HOXA3-202ENST00000396352 GUK1Q16774 197 aa13.62□□□□□ -0.23
HOXA3-202ENST00000396352 COMMD1Q8N668 190 aa13.62□□□□□ -0.23
HOXA3-202ENST00000396352 OR11L1Q8NGX0 322 aa13.62□□□□□ -0.23
HOXA3-202ENST00000396352 JSRP1Q96MG2 331 aaPredicted RBP13.62□□□□□ -0.23
HOXA3-202ENST00000396352 DUSP23Q9BVJ7 150 aa13.62□□□□□ -0.23
HOXA3-202ENST00000396352 IFT22Q9H7X7 185 aa13.62□□□□□ -0.23
HOXA3-202ENST00000396352 RPS10P5Q9NQ39 176 aa13.62□□□□□ -0.23
HOXA3-202ENST00000396352 RAB5BP61020 215 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 GPR157Q5UAW9 335 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 LHFPL2Q6ZUX7 228 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 OR1F12Q8NHA8 337 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 PI4KAP42356 2102 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 NCKAP5O14513 1909 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 OR6C6A6NF89 314 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 C1QL1O75973 258 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 SNRPEP62304 92 aaKnown RBP13.61□□□□□ -0.23
HOXA3-202ENST00000396352 MOB3AQ96BX8 217 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 BORCS8Q96FH0 119 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 ZNF700Q9H0M5 742 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 BORCS7-ASMTA0A0B4J1R7 106 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 K7ESF4 209 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 ACAA1P09110 424 aaPredicted RBP13.61□□□□□ -0.23
HOXA3-202ENST00000396352 CST2P09228 141 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 ZNF44P15621 663 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 DUSP1P28562 367 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 RAC1P63000 192 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 FBXL14Q8N1E6 418 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 OSR2Q8N2R0 312 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 NAXEQ8NCW5 288 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 IP6K3Q96PC2 410 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 CRLF2Q9HC73 371 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 C19orf12Q9NSK7 152 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 LUZP4Q9P127 313 aa13.61□□□□□ -0.23
HOXA3-202ENST00000396352 SHANK1Q9Y566 2161 aa13.6□□□□□ -0.23
HOXA3-202ENST00000396352 LCATP04180 440 aa13.6□□□□□ -0.23
HOXA3-202ENST00000396352 PATE4P0C8F1 98 aa13.6□□□□□ -0.23
HOXA3-202ENST00000396352 NHLH2Q02577 135 aa13.6□□□□□ -0.23
HOXA3-202ENST00000396352 IL13RA2Q14627 380 aa13.6□□□□□ -0.23
HOXA3-202ENST00000396352 DAZAP2Q15038 168 aaPredicted RBP13.6□□□□□ -0.23
HOXA3-202ENST00000396352 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.6□□□□□ -0.23
HOXA3-202ENST00000396352 KDF1Q8NAX2 398 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms