RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 FAM90A24PP0C7X0 464 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 PGA5P0DJD9 388 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 MRPS15P82914 257 aaKnown RBP13.06□□□□□ -0.32
VAMP1-202ENST00000396308 PLA2G7Q13093 441 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 IL13RA2Q14627 380 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 ZNF181Q2M3W8 571 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 MPV17LQ2QL34 196 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 NHLRC3Q5JS37 347 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 MOGAT3Q86VF5 341 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 C1orf87Q8N0U7 546 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 Q8N402 240 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 DTX3Q8N9I9 347 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 LILRB1Q8NHL6 650 aaPredicted RBP13.06□□□□□ -0.32
VAMP1-202ENST00000396308 ZFAND2BQ8WV99 257 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 SPACA1Q9HBV2 294 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 RBFOX1Q9NWB1 397 aaKnown RBP13.06□□□□□ -0.32
VAMP1-202ENST00000396308 RASL12Q9NYN1 266 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 MTCH1Q9NZJ7 389 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 PPP1R3CQ9UQK1 317 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 TANC2Q9HCD6 1990 aa13.05□□□□□ -0.32
VAMP1-202ENST00000396308 CHD3Q12873 2000 aaKnown RBP13.05□□□□□ -0.32
VAMP1-202ENST00000396308 CTDSPLO15194 276 aa13.05□□□□□ -0.32
VAMP1-202ENST00000396308 NOS1APO75052 506 aaPredicted RBP13.05□□□□□ -0.32
VAMP1-202ENST00000396308 RHBDL1O75783 438 aa13.05□□□□□ -0.32
VAMP1-202ENST00000396308 SFTPBP07988 381 aa13.05□□□□□ -0.32
VAMP1-202ENST00000396308 GSTP1P09211 210 aaKnown RBP13.05□□□□□ -0.32
VAMP1-202ENST00000396308 RNF224P0DH78 156 aa13.05□□□□□ -0.32
VAMP1-202ENST00000396308 GLRA1P23415 457 aa13.05□□□□□ -0.32
VAMP1-202ENST00000396308 BLVRBP30043 206 aaPredicted RBP13.05□□□□□ -0.32
VAMP1-202ENST00000396308 IKZF1Q13422 519 aa13.05□□□□□ -0.32
VAMP1-202ENST00000396308 ZNF79Q15937 498 aa13.05□□□□□ -0.32
VAMP1-202ENST00000396308 SPIN3Q5JUX0 258 aa13.05□□□□□ -0.32
VAMP1-202ENST00000396308 WDR82Q6UXN9 313 aa13.05□□□□□ -0.32
VAMP1-202ENST00000396308 C19orf18Q8NEA5 215 aa13.05□□□□□ -0.32
VAMP1-202ENST00000396308 Q8NFD4 153 aa13.05□□□□□ -0.32
VAMP1-202ENST00000396308 LRRC29Q8WV35 223 aa13.05□□□□□ -0.32
VAMP1-202ENST00000396308 FCAMRQ8WWV6 532 aa13.05□□□□□ -0.32
VAMP1-202ENST00000396308 VRK1Q99986 396 aaPredicted RBP13.05□□□□□ -0.32
VAMP1-202ENST00000396308 NRIP2Q9BQI9 281 aa13.05□□□□□ -0.32
VAMP1-202ENST00000396308 NICN1Q9BSH3 213 aa13.05□□□□□ -0.32
VAMP1-202ENST00000396308 RAB1BQ9H0U4 201 aa13.05□□□□□ -0.32
VAMP1-202ENST00000396308 NPTNQ9Y639 398 aa13.05□□□□□ -0.32
VAMP1-202ENST00000396308 PLCE1Q9P212 2302 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 UPK1BO75841 260 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 OR7C1O76099 320 aaPredicted RBP13.04□□□□□ -0.32
VAMP1-202ENST00000396308 HIST1H1DP16402 221 aaKnown RBP13.04□□□□□ -0.32
VAMP1-202ENST00000396308 PRSS3P35030 304 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 NPBWR2P48146 333 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 SNU13P55769 128 aaKnown RBP13.04□□□□□ -0.32
VAMP1-202ENST00000396308 DEFA1P59665 94 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 DEFA3P59666 94 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 GNG2P59768 71 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 CCL8P80075 99 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 TLE4Q04727 773 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 MPPED2Q15777 294 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 SWI5Q1ZZU3 235 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 PIGYQ3MUY2 71 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 NKAPLQ5M9Q1 402 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 HACD4Q5VWC8 232 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 Q6ZTK2 550 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 BATF2Q8N1L9 274 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 FAM89BQ8N5H3 189 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 SOSTQ9BQB4 213 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 SCPEP1Q9HB40 452 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 ABCB10Q9NRK6 738 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 PLEKHJ1Q9NW61 149 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 RNF7Q9UBF6 113 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 DNAJB11Q9UBS4 358 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 HECTD1Q9ULT8 2610 aa13.04□□□□□ -0.32
VAMP1-202ENST00000396308 SPTBN1Q01082 2364 aaKnown RBP13.03□□□□□ -0.32
VAMP1-202ENST00000396308 A1L4Q6 167 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 SERPINE3A8MV23 424 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 GABARAPH6UMI1 98 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 RAB27BO00194 218 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 SULT1C2O00338 296 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 SH2D1BO14796 132 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 GSTZ1O43708 216 aaPredicted RBP13.03□□□□□ -0.32
VAMP1-202ENST00000396308 PDCD6O75340 191 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 CFHR2P36980 270 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 PTH2RP49190 550 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 AP3S2P59780 193 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 ACTBP60709 375 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 GMFBP60983 142 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 ACTG1P63261 375 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 SCN1BQ07699 218 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 ARFRP1Q13795 201 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 TAF9Q16594 264 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 PNLIPRP3Q17RR3 467 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 ATAD3CQ5T2N8 411 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 C20orf204Q6ZNR8 217 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 ZNF826PQ6ZT77 177 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 FAM90A1Q86YD7 464 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 Q8TCH9 128 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 NEK7Q8TDX7 302 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 SMIM4Q8WVI0 70 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 ZNF488Q96MN9 340 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 AUNIPQ9H7T9 357 aa13.03□□□□□ -0.32
VAMP1-202ENST00000396308 DYSFO75923 2080 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 CLEC18AA5D8T8 446 aa13.02□□□□□ -0.33
VAMP1-202ENST00000396308 GEMIN2O14893 280 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms