RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 SHPKQ9UHJ6 478 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 RBMX2Q9Y388 322 aaKnown RBP2.97□□□□□ -1.93
VPS13C-203ENST00000395896 GPR37O15354 613 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 S100A9P06702 114 aaKnown RBP2.97□□□□□ -1.93
VPS13C-203ENST00000395896 SUB1P53999 127 aaKnown RBP eCLIP2.97□□□□□ -1.934e-6■■■■■ 28.5
VPS13C-203ENST00000395896 PLA2G7Q13093 441 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF385CQ66K41 422 aaPredicted RBP2.97□□□□□ -1.93
VPS13C-203ENST00000395896 FAM90A1Q86YD7 464 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 TMEM105Q8N8V8 129 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF485Q8NCK3 441 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 FN3KRPQ9HA64 309 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 FLNAP21333 2647 aaKnown RBP2.97□□□□□ -1.93
VPS13C-203ENST00000395896 CENPVL1A0A0U1RR11 272 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 MS4A18H0YCH9 400 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 C16orf97H3BN30 126 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 NTN1O95631 604 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 MAGEA5P43359 124 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 MS4A18Q3C1V0 323 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 CEACAM21Q3KPI0 293 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 LYG2Q86SG7 212 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 OCEL1Q9H607 264 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 ANKRD20A5PA0PJZ0 165 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 PNPP00491 289 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 CD3DP04234 171 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 OTX1P32242 354 aaPredicted RBP2.97□□□□□ -1.93
VPS13C-203ENST00000395896 BAK1Q16611 211 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 RTL8BQ17RB0 113 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 IAH1Q2TAA2 248 aaPredicted RBP2.97□□□□□ -1.93
VPS13C-203ENST00000395896 HFEQ30201 348 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 COMMD1Q8N668 190 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 OR2I1PQ8NGU4 316 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 NTNG2Q96CW9 530 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 CNTD2Q9H8S5 307 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 GPR35Q9HC97 309 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 BOD1L1Q8NFC6 3051 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 OR1J1Q8NGS3 322 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 OR2H1Q9GZK4 316 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 RAB1BQ9H0U4 201 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 GAL3ST2Q9H3Q3 398 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 IL36GQ9NZH8 169 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 V9GYH0 126 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 AGRNO00468 2067 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 BET1O15155 118 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 PPP1CBP62140 327 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 PDZK1IP1Q13113 114 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 DHRS2Q13268 280 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 C1QL3Q5VWW1 255 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 RPUSD3Q6P087 351 aaKnown RBP2.97□□□□□ -1.93
VPS13C-203ENST00000395896 BHLHE23Q8NDY6 225 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 OR51A4Q8NGJ6 313 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 OR1S1Q8NH92 325 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 ELOVL5Q9NYP7 299 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 KCNS2Q9ULS6 477 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 C17orf112F2Z3M2 114 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 DCTN6O00399 190 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 FABP7O15540 132 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 MT-ND4P03905 459 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 PDLIM3Q53GG5 364 aaPredicted RBP2.97□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF774Q6NX45 483 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 FAM169BQ8N8A8 192 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 SCMH1Q96GD3 660 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 HSD17B10Q99714 261 aaKnown RBP2.97□□□□□ -1.93
VPS13C-203ENST00000395896 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.97□□□□□ -1.933e-6■■■■□ 26.5
VPS13C-203ENST00000395896 TUBD1Q9UJT1 453 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 ZMIZ1Q9ULJ6 1067 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 LHFPL6Q9Y693 200 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 H3BSH0 61 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 ZIC3O60481 467 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 CDC14BO60729 498 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 CST4P01036 141 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF529Q6P280 563 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 TEX29Q8N6K0 151 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 OR4C16Q8NGL9 310 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 MITD1Q8WV92 249 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 DMRTB1Q96MA1 342 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 DEFB127Q9H1M4 99 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 RASL12Q9NYN1 266 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 DSCAML1Q8TD84 2053 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 H7C2Y5 167 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 J3QT63 122 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 SOX18P35713 384 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 PPT1P50897 306 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 BAXQ07812 192 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 RTP5Q14D33 572 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 SPNS2Q8IVW8 549 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 LILRB2Q8N423 598 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 OR4A4PQ8NGN8 299 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 OR5M8Q8NGP6 311 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 SUN5Q8TC36 379 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 DCUN1D4Q92564 292 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 SLC25A32Q9H2D1 315 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 C12orf49Q9H741 205 aa2.97□□□□□ -1.93
VPS13C-203ENST00000395896 RANGRFQ9HD47 186 aaPredicted RBP2.97□□□□□ -1.93
VPS13C-203ENST00000395896 hADV38S2A0JD32 116 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 C10orf142B7Z368 130 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 IL18BPO95998 194 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 APOA2P02652 100 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 TTRP02766 147 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 HLA-DOBP13765 273 aa2.96□□□□□ -1.93
VPS13C-203ENST00000395896 NANOS3P60323 173 aaKnown RBP2.96□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms