RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 DDTP30046 118 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 ZNF788Q6ZQV5 615 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 OIT3Q8WWZ8 545 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 TREX1Q9NSU2 369 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 ONECUT1Q9UBC0 465 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 RER1O15258 196 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 SLC19A1P41440 591 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 DHRS2Q13268 280 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 ZNF841Q6ZN19 808 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 RNF165Q6ZSG1 346 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 OSTM1Q86WC4 334 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 IP6K3Q96PC2 410 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 ZNF346Q9UL40 294 aaKnown RBP12.08□□□□□ -0.48
USP49-203ENST00000394253 TANC2Q9HCD6 1990 aa12.08□□□□□ -0.48
USP49-203ENST00000394253 SLC2A10O95528 541 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 MGPP08493 103 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 PRSS56P0CW18 603 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 LGALS3P17931 250 aaKnown RBP12.07□□□□□ -0.48
USP49-203ENST00000394253 FAAP20Q6NZ36 180 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 NUFIP2Q7Z417 695 aaKnown RBP12.07□□□□□ -0.48
USP49-203ENST00000394253 TMEM210A6NLX4 147 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 SNURFLB1AK76 121 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 ZNF749O43361 778 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 ACRP10323 421 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 GPR3P46089 330 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 FUT7Q11130 342 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 WDR34Q96EX3 536 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 IGSF21Q96ID5 467 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 CDX4O14627 284 aaPredicted RBP12.07□□□□□ -0.48
USP49-203ENST00000394253 BTG2P78543 158 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 ZNF775Q96BV0 537 aaPredicted RBP12.07□□□□□ -0.48
USP49-203ENST00000394253 DERL3Q96Q80 235 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 BCL9O00512 1426 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 FCGR3AP08637 254 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 ZNF98A6NK75 572 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 CTNSO60931 367 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 THBS4P35443 961 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 CAMKMTQ7Z624 323 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 S1PR5Q9H228 398 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 TAAR2Q9P1P5 351 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 MPC2O95563 127 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 CLEC2LP0C7M8 214 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 TNFRSF1AP19438 455 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 PRRX1P54821 245 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 FAHD2BQ6P2I3 314 aaPredicted RBP12.07□□□□□ -0.48
USP49-203ENST00000394253 THOC3Q96J01 351 aaKnown RBP12.07□□□□□ -0.48
USP49-203ENST00000394253 PCSK6P29122 969 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 SYT8Q8NBV8 401 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 TBX21Q9UL17 535 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 PTPRDP23468 1912 aa12.07□□□□□ -0.48
USP49-203ENST00000394253 SLC37A1P57057 533 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 SLC25A34Q6PIV7 304 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 GJB5O95377 273 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 ARHGAP21Q5T5U3 1957 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 MPDU1O75352 247 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 SEMG1P04279 462 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 FGF8P55075 233 aaPredicted RBP12.06□□□□□ -0.48
USP49-203ENST00000394253 RUNX3Q13761 415 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 SPANXN1Q5VSR9 72 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 ZNF384Q8TF68 577 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 CDCA3Q99618 268 aaPredicted RBP12.06□□□□□ -0.48
USP49-203ENST00000394253 C1QTNF9BB2RNN3 333 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 HERPUD1Q15011 391 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 GBGT1Q8N5D6 347 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 TNFSF11O14788 317 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 CRYAAP02489 173 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 CCR5P51681 352 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 JMJD6Q6NYC1 403 aaPredicted RBP12.06□□□□□ -0.48
USP49-203ENST00000394253 LHFPL5Q8TAF8 219 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 Q8WTZ3 238 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 GEMIN2O14893 280 aaKnown RBP12.06□□□□□ -0.48
USP49-203ENST00000394253 NDUFB6O95139 128 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 SCAND1P57086 179 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 ZNF506Q5JVG8 444 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 OR2C3Q8N628 320 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 PTX4Q96A99 478 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 PBOV1Q9GZY1 135 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 LRRC37A3O60309 1634 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 IER3P46695 156 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 CACNG7P62955 275 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 WDFY1Q8IWB7 410 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 RHBDD1Q8TEB9 315 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 AQP10Q96PS8 301 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 ATP23Q9Y6H3 246 aa12.06□□□□□ -0.48
USP49-203ENST00000394253 PRSS2P07478 247 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 TEX29Q8N6K0 151 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 PPP1R17O96001 155 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 RELQ04864 619 aaPredicted RBP12.05□□□□□ -0.48
USP49-203ENST00000394253 TMEM64Q6YI46 380 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 HHIPQ96QV1 700 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 GLIPR2Q9H4G4 154 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 EML6Q6ZMW3 1958 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 GSTZ1O43708 216 aaPredicted RBP12.05□□□□□ -0.48
USP49-203ENST00000394253 MRPL58Q14197 206 aaKnown RBP12.05□□□□□ -0.48
USP49-203ENST00000394253 PLPPR5Q32ZL2 321 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 TMEM215Q68D42 235 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 ARIH2OSQ8N7S6 290 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 ST8SIA1Q92185 356 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 Q96M85 177 aa12.05□□□□□ -0.48
USP49-203ENST00000394253 DDA1Q9BW61 102 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms